Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC33.31■■■□□ 2.92
CUX2O14529 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC33.31■■■□□ 2.92
CUX2O14529 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC33.31■■■□□ 2.92
CUX2O14529 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC33.31■■■□□ 2.92
CUX2O14529 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC33.31■■■□□ 2.92
CUX2O14529 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC33.31■■■□□ 2.92
CUX2O14529 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC33.31■■■□□ 2.92
CUX2O14529 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC33.3■■■□□ 2.92
CUX2O14529 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC33.3■■■□□ 2.92
CUX2O14529 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
CUX2O14529 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
CUX2O14529 AC244015.2-201ENST00000616358 1861 ntBASIC33.3■■■□□ 2.92
CUX2O14529 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC33.3■■■□□ 2.92
CUX2O14529 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
CUX2O14529 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
CUX2O14529 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
CUX2O14529 TOB2P1-201ENST00000469761 992 ntBASIC33.3■■■□□ 2.92
CUX2O14529 TPM1-218ENST00000559281 851 ntTSL 5 BASIC33.3■■■□□ 2.92
CUX2O14529 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
CUX2O14529 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC33.3■■■□□ 2.92
CUX2O14529 ABBA01031661.1-201ENST00000634362 1253 ntBASIC33.3■■■□□ 2.92
CUX2O14529 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC33.3■■■□□ 2.92
CUX2O14529 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC33.3■■■□□ 2.92
CUX2O14529 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC33.29■■■□□ 2.92
CUX2O14529 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
CUX2O14529 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC33.29■■■□□ 2.92
CUX2O14529 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC33.29■■■□□ 2.92
CUX2O14529 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC33.29■■■□□ 2.92
CUX2O14529 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
CUX2O14529 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC33.29■■■□□ 2.92
CUX2O14529 HTR5BP-201ENST00000430851 1154 ntBASIC33.29■■■□□ 2.92
CUX2O14529 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC33.29■■■□□ 2.92
CUX2O14529 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
CUX2O14529 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
CUX2O14529 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC33.28■■■□□ 2.92
CUX2O14529 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC33.28■■■□□ 2.92
CUX2O14529 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC33.28■■■□□ 2.92
CUX2O14529 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC33.27■■■□□ 2.92
CUX2O14529 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC33.27■■■□□ 2.92
CUX2O14529 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC33.27■■■□□ 2.92
CUX2O14529 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
CUX2O14529 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
CUX2O14529 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC33.27■■■□□ 2.92
CUX2O14529 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC33.27■■■□□ 2.92
CUX2O14529 ABR-204ENST00000543210 1049 ntTSL 2 BASIC33.27■■■□□ 2.92
CUX2O14529 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC33.27■■■□□ 2.92
CUX2O14529 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC33.27■■■□□ 2.92
CUX2O14529 AC116351.2-201ENST00000606540 1585 ntBASIC33.27■■■□□ 2.92
CUX2O14529 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC33.27■■■□□ 2.92
CUX2O14529 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC33.26■■■□□ 2.92
CUX2O14529 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
CUX2O14529 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC33.26■■■□□ 2.92
CUX2O14529 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC33.26■■■□□ 2.92
CUX2O14529 REXO1L6P-202ENST00000619970 1078 ntBASIC33.26■■■□□ 2.92
CUX2O14529 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
CUX2O14529 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC33.26■■■□□ 2.92
CUX2O14529 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC33.26■■■□□ 2.91
CUX2O14529 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
CUX2O14529 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
CUX2O14529 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC33.26■■■□□ 2.91
CUX2O14529 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC33.25■■■□□ 2.91
CUX2O14529 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC33.25■■■□□ 2.91
CUX2O14529 AC073648.2-201ENST00000510116 352 ntBASIC33.25■■■□□ 2.91
CUX2O14529 AC138894.3-201ENST00000603787 634 ntBASIC33.25■■■□□ 2.91
CUX2O14529 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC33.25■■■□□ 2.91
CUX2O14529 LSR-203ENST00000360798 1963 ntTSL 2 BASIC33.25■■■□□ 2.91
CUX2O14529 AL162741.1-201ENST00000565563 1558 ntBASIC33.25■■■□□ 2.91
CUX2O14529 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
CUX2O14529 H19-201ENST00000411754 1788 ntTSL 5 BASIC33.25■■■□□ 2.91
CUX2O14529 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
CUX2O14529 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
CUX2O14529 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC33.25■■■□□ 2.91
CUX2O14529 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC33.25■■■□□ 2.91
CUX2O14529 DFFB-203ENST00000341385 572 ntTSL 5 BASIC33.25■■■□□ 2.91
CUX2O14529 AC034232.1-201ENST00000506026 1064 ntBASIC33.25■■■□□ 2.91
CUX2O14529 PGAM5P1-201ENST00000518923 814 ntBASIC33.25■■■□□ 2.91
CUX2O14529 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC33.25■■■□□ 2.91
CUX2O14529 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC33.25■■■□□ 2.91
CUX2O14529 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC33.24■■■□□ 2.91
CUX2O14529 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
CUX2O14529 TFP1-202ENST00000475455 1573 ntBASIC33.24■■■□□ 2.91
CUX2O14529 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC33.24■■■□□ 2.91
CUX2O14529 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC33.24■■■□□ 2.91
CUX2O14529 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC33.24■■■□□ 2.91
CUX2O14529 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
CUX2O14529 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC33.23■■■□□ 2.91
CUX2O14529 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
CUX2O14529 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC33.23■■■□□ 2.91
CUX2O14529 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
CUX2O14529 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC33.23■■■□□ 2.91
CUX2O14529 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
CUX2O14529 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC33.23■■■□□ 2.91
CUX2O14529 AC239800.4-201ENST00000603712 296 ntBASIC33.23■■■□□ 2.91
CUX2O14529 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC33.23■■■□□ 2.91
CUX2O14529 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC33.22■■■□□ 2.91
CUX2O14529 AC243591.1-201ENST00000452967 1364 ntBASIC33.22■■■□□ 2.91
CUX2O14529 Z98882.1-201ENST00000622160 2253 ntBASIC33.22■■■□□ 2.91
CUX2O14529 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
CUX2O14529 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC33.22■■■□□ 2.91
CUX2O14529 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms