Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF223E7ERA6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
RNF223E7ERA6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF223E7ERA6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
RNF223E7ERA6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF223E7ERA6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF223E7ERA6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF223E7ERA6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF223E7ERA6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF223E7ERA6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF223E7ERA6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF223E7ERA6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RNF223E7ERA6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF223E7ERA6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF223E7ERA6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RNF223E7ERA6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF223E7ERA6 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF223E7ERA6 VENTXP5-201ENST00000523979 775 ntBASIC16.1■□□□□ 0.17
RNF223E7ERA6 AP003041.3-201ENST00000527151 707 ntBASIC16.1■□□□□ 0.17
RNF223E7ERA6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF223E7ERA6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.1■□□□□ 0.17
RNF223E7ERA6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.1■□□□□ 0.17
RNF223E7ERA6 AC069148.1-201ENST00000608741 768 ntBASIC16.1■□□□□ 0.17
RNF223E7ERA6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF223E7ERA6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RNF223E7ERA6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF223E7ERA6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF223E7ERA6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF223E7ERA6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF223E7ERA6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF223E7ERA6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF223E7ERA6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF223E7ERA6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RNF223E7ERA6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF223E7ERA6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF223E7ERA6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF223E7ERA6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF223E7ERA6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF223E7ERA6 KRT18P38-201ENST00000449496 1282 ntBASIC16.09■□□□□ 0.17
RNF223E7ERA6 CA15P1-201ENST00000481698 905 ntBASIC16.09■□□□□ 0.17
RNF223E7ERA6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
RNF223E7ERA6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF223E7ERA6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.09■□□□□ 0.17
RNF223E7ERA6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.09■□□□□ 0.17
RNF223E7ERA6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF223E7ERA6 CLEC4GP1-201ENST00000596555 870 ntBASIC16.09■□□□□ 0.17
RNF223E7ERA6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.09■□□□□ 0.17
RNF223E7ERA6 AC116407.4-201ENST00000623319 1061 ntBASIC16.09■□□□□ 0.17
RNF223E7ERA6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.09■□□□□ 0.17
RNF223E7ERA6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF223E7ERA6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF223E7ERA6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF223E7ERA6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF223E7ERA6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF223E7ERA6 LINC01465-201ENST00000408887 1940 ntBASIC16.09■□□□□ 0.17
RNF223E7ERA6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RNF223E7ERA6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
RNF223E7ERA6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RNF223E7ERA6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF223E7ERA6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.08■□□□□ 0.17
RNF223E7ERA6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF223E7ERA6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
RNF223E7ERA6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RNF223E7ERA6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF223E7ERA6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF223E7ERA6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF223E7ERA6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF223E7ERA6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF223E7ERA6 AL845331.1-201ENST00000424978 1190 ntBASIC16.08■□□□□ 0.16
RNF223E7ERA6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF223E7ERA6 PRSS44-201ENST00000515154 1146 ntBASIC16.08■□□□□ 0.16
RNF223E7ERA6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF223E7ERA6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF223E7ERA6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.08■□□□□ 0.16
RNF223E7ERA6 AC008622.2-201ENST00000617006 1229 ntBASIC16.08■□□□□ 0.16
RNF223E7ERA6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RNF223E7ERA6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
RNF223E7ERA6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF223E7ERA6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF223E7ERA6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF223E7ERA6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF223E7ERA6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF223E7ERA6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF223E7ERA6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF223E7ERA6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RNF223E7ERA6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF223E7ERA6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF223E7ERA6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF223E7ERA6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF223E7ERA6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF223E7ERA6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.07■□□□□ 0.16
RNF223E7ERA6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF223E7ERA6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF223E7ERA6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF223E7ERA6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF223E7ERA6 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF223E7ERA6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF223E7ERA6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF223E7ERA6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF223E7ERA6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms