Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SRRM3A6NNA2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SRRM3A6NNA2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.07■□□□□ 0.8
SRRM3A6NNA2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.07■□□□□ 0.8
SRRM3A6NNA2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SRRM3A6NNA2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SRRM3A6NNA2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SRRM3A6NNA2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRRM3A6NNA2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.06■□□□□ 0.8
SRRM3A6NNA2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRRM3A6NNA2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRRM3A6NNA2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRRM3A6NNA2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRRM3A6NNA2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRRM3A6NNA2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRRM3A6NNA2 AC087499.1-201ENST00000418141 1075 ntBASIC20.06■□□□□ 0.8
SRRM3A6NNA2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.06■□□□□ 0.8
SRRM3A6NNA2 RN7SL471P-201ENST00000580476 299 ntBASIC20.06■□□□□ 0.8
SRRM3A6NNA2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.06■□□□□ 0.8
SRRM3A6NNA2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRRM3A6NNA2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRRM3A6NNA2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRRM3A6NNA2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SRRM3A6NNA2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SRRM3A6NNA2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.06■□□□□ 0.8
SRRM3A6NNA2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRRM3A6NNA2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SRRM3A6NNA2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.05■□□□□ 0.8
SRRM3A6NNA2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
SRRM3A6NNA2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRRM3A6NNA2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SRRM3A6NNA2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRRM3A6NNA2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.05■□□□□ 0.8
SRRM3A6NNA2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SRRM3A6NNA2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRRM3A6NNA2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SRRM3A6NNA2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRRM3A6NNA2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SRRM3A6NNA2 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.05■□□□□ 0.8
SRRM3A6NNA2 TMPOP1-202ENST00000424642 1267 ntBASIC20.05■□□□□ 0.8
SRRM3A6NNA2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.05■□□□□ 0.8
SRRM3A6NNA2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SRRM3A6NNA2 AC097493.4-201ENST00000641197 219 ntBASIC20.05■□□□□ 0.8
SRRM3A6NNA2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SRRM3A6NNA2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRRM3A6NNA2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
SRRM3A6NNA2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
SRRM3A6NNA2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRRM3A6NNA2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SRRM3A6NNA2 AP000997.3-201ENST00000623333 2250 ntBASIC20.04■□□□□ 0.8
SRRM3A6NNA2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRRM3A6NNA2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SRRM3A6NNA2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRRM3A6NNA2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SRRM3A6NNA2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SRRM3A6NNA2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRRM3A6NNA2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.03■□□□□ 0.8
SRRM3A6NNA2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.03■□□□□ 0.8
SRRM3A6NNA2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.03■□□□□ 0.8
SRRM3A6NNA2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRRM3A6NNA2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRRM3A6NNA2 TSPY7P-201ENST00000431358 1114 ntBASIC20.03■□□□□ 0.8
SRRM3A6NNA2 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRRM3A6NNA2 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
SRRM3A6NNA2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.03■□□□□ 0.8
SRRM3A6NNA2 AC012306.2-201ENST00000609350 630 ntBASIC20.03■□□□□ 0.8
SRRM3A6NNA2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRRM3A6NNA2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.03■□□□□ 0.8
SRRM3A6NNA2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.03■□□□□ 0.8
SRRM3A6NNA2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRRM3A6NNA2 AC009113.1-201ENST00000570267 2443 ntBASIC20.03■□□□□ 0.8
SRRM3A6NNA2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.03■□□□□ 0.8
SRRM3A6NNA2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRRM3A6NNA2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRRM3A6NNA2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRRM3A6NNA2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SRRM3A6NNA2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms