Protein–RNA interactions for Protein: A6NKF1

SAC3D1, SAC3 domain-containing protein 1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAC3D1A6NKF1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 AC068880.1-201ENST00000507289 2297 ntBASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 IRS3P-201ENST00000223076 1006 ntBASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 NOC2LP2-201ENST00000407594 1944 ntBASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 AC141586.3-201ENST00000562166 1838 ntBASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.19■□□□□ 0.5
SAC3D1A6NKF1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 FP475955.4-201ENST00000623131 1990 ntBASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SAC3D1A6NKF1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 RASA4CP-201ENST00000424092 1398 ntBASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SAC3D1A6NKF1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms