Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
TBC1D3FA6NER0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TBC1D3FA6NER0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D3FA6NER0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TBC1D3FA6NER0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TBC1D3FA6NER0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D3FA6NER0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TBC1D3FA6NER0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D3FA6NER0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D3FA6NER0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D3FA6NER0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 AC104076.2-201ENST00000448912 469 ntBASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.3■□□□□ 0.68
TBC1D3FA6NER0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.29■□□□□ 0.68
TBC1D3FA6NER0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.29■□□□□ 0.68
TBC1D3FA6NER0 AC099778.1-201ENST00000568593 1911 ntBASIC19.29■□□□□ 0.68
TBC1D3FA6NER0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TBC1D3FA6NER0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D3FA6NER0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D3FA6NER0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TBC1D3FA6NER0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TBC1D3FA6NER0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D3FA6NER0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D3FA6NER0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D3FA6NER0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D3FA6NER0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.29■□□□□ 0.68
TBC1D3FA6NER0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.29■□□□□ 0.68
TBC1D3FA6NER0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.29■□□□□ 0.68
TBC1D3FA6NER0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
TBC1D3FA6NER0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.29■□□□□ 0.68
TBC1D3FA6NER0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D3FA6NER0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TBC1D3FA6NER0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.29■□□□□ 0.68
TBC1D3FA6NER0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TBC1D3FA6NER0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TBC1D3FA6NER0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.29■□□□□ 0.68
TBC1D3FA6NER0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 SLC25A1P2-201ENST00000430693 912 ntBASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 FAM87A-204ENST00000613235 858 ntBASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 LINC01006-201ENST00000333319 2292 ntBASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3FA6NER0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.27■□□□□ 0.68
TBC1D3FA6NER0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TBC1D3FA6NER0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.27■□□□□ 0.68
TBC1D3FA6NER0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TBC1D3FA6NER0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TBC1D3FA6NER0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.27■□□□□ 0.68
TBC1D3FA6NER0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.27■□□□□ 0.68
TBC1D3FA6NER0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TBC1D3FA6NER0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms