Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV5-4A0A0C4DH59 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV5-4A0A0C4DH59 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.13■□□□□ 0.65
TRBV5-4A0A0C4DH59 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRBV5-4A0A0C4DH59 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.12■□□□□ 0.65
TRBV5-4A0A0C4DH59 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-4A0A0C4DH59 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRBV5-4A0A0C4DH59 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-4A0A0C4DH59 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TRBV5-4A0A0C4DH59 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-4A0A0C4DH59 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.12■□□□□ 0.65
TRBV5-4A0A0C4DH59 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-4A0A0C4DH59 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-4A0A0C4DH59 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.12■□□□□ 0.65
TRBV5-4A0A0C4DH59 AC012618.2-201ENST00000428058 849 ntBASIC19.12■□□□□ 0.65
TRBV5-4A0A0C4DH59 AC004980.1-204ENST00000429707 299 ntBASIC19.12■□□□□ 0.65
TRBV5-4A0A0C4DH59 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.12■□□□□ 0.65
TRBV5-4A0A0C4DH59 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.12■□□□□ 0.65
TRBV5-4A0A0C4DH59 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-4A0A0C4DH59 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.12■□□□□ 0.65
TRBV5-4A0A0C4DH59 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-4A0A0C4DH59 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-4A0A0C4DH59 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.12■□□□□ 0.65
TRBV5-4A0A0C4DH59 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-4A0A0C4DH59 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.11■□□□□ 0.65
TRBV5-4A0A0C4DH59 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV5-4A0A0C4DH59 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.11■□□□□ 0.65
TRBV5-4A0A0C4DH59 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV5-4A0A0C4DH59 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.11■□□□□ 0.65
TRBV5-4A0A0C4DH59 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.11■□□□□ 0.65
TRBV5-4A0A0C4DH59 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.11■□□□□ 0.65
TRBV5-4A0A0C4DH59 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.11■□□□□ 0.65
TRBV5-4A0A0C4DH59 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.11■□□□□ 0.65
TRBV5-4A0A0C4DH59 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TRBV5-4A0A0C4DH59 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV5-4A0A0C4DH59 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
TRBV5-4A0A0C4DH59 TEX21P-204ENST00000641479 1693 ntBASIC19.11■□□□□ 0.65
TRBV5-4A0A0C4DH59 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.11■□□□□ 0.65
TRBV5-4A0A0C4DH59 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.11■□□□□ 0.65
TRBV5-4A0A0C4DH59 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.11■□□□□ 0.65
TRBV5-4A0A0C4DH59 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 KRT8P41-201ENST00000533985 1514 ntBASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 KRT16P1-201ENST00000399124 1418 ntBASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 RPS2P55-201ENST00000397318 883 ntBASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 AC107956.1-201ENST00000494359 873 ntBASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 AC233702.5-201ENST00000584107 538 ntBASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-4A0A0C4DH59 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 AC141586.3-201ENST00000562166 1838 ntBASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 AC131212.4-201ENST00000623606 975 ntBASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-4A0A0C4DH59 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms