Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV41A0A0B4J266 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV41A0A0B4J266 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV41A0A0B4J266 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV41A0A0B4J266 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV41A0A0B4J266 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV41A0A0B4J266 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 AP001412.1-201ENST00000608405 714 ntBASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 TREX1-205ENST00000625293 1783 ntBASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV41A0A0B4J266 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 AC012618.2-201ENST00000428058 849 ntBASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 AC008550.1-201ENST00000511500 884 ntBASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 AF186192.3-201ENST00000583427 947 ntBASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 AL353708.3-201ENST00000610272 989 ntBASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV41A0A0B4J266 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV41A0A0B4J266 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV41A0A0B4J266 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV41A0A0B4J266 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV41A0A0B4J266 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV41A0A0B4J266 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV41A0A0B4J266 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV41A0A0B4J266 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV41A0A0B4J266 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV41A0A0B4J266 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV41A0A0B4J266 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV41A0A0B4J266 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV41A0A0B4J266 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV41A0A0B4J266 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV41A0A0B4J266 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV41A0A0B4J266 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV41A0A0B4J266 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAV41A0A0B4J266 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV41A0A0B4J266 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV41A0A0B4J266 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV41A0A0B4J266 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAV41A0A0B4J266 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV41A0A0B4J266 RPS2P55-201ENST00000397318 883 ntBASIC15.26■□□□□ 0.03
TRAV41A0A0B4J266 NIFKP9-201ENST00000419265 221 ntBASIC15.26■□□□□ 0.03
TRAV41A0A0B4J266 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV41A0A0B4J266 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV41A0A0B4J266 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV41A0A0B4J266 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV41A0A0B4J266 AC107956.1-201ENST00000494359 873 ntBASIC15.26■□□□□ 0.03
TRAV41A0A0B4J266 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.26■□□□□ 0.03
TRAV41A0A0B4J266 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV41A0A0B4J266 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAV41A0A0B4J266 AC073195.1-201ENST00000607241 877 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms