Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV5A0A0B4J1U4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV5A0A0B4J1U4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV5A0A0B4J1U4 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.4■□□□□ 0.38
TRGV5A0A0B4J1U4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.4■□□□□ 0.38
TRGV5A0A0B4J1U4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.4■□□□□ 0.38
TRGV5A0A0B4J1U4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.4■□□□□ 0.38
TRGV5A0A0B4J1U4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.4■□□□□ 0.38
TRGV5A0A0B4J1U4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV5A0A0B4J1U4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.4■□□□□ 0.38
TRGV5A0A0B4J1U4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.4■□□□□ 0.38
TRGV5A0A0B4J1U4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV5A0A0B4J1U4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.4■□□□□ 0.38
TRGV5A0A0B4J1U4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.4■□□□□ 0.38
TRGV5A0A0B4J1U4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.4■□□□□ 0.38
TRGV5A0A0B4J1U4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV5A0A0B4J1U4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.39■□□□□ 0.38
TRGV5A0A0B4J1U4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRGV5A0A0B4J1U4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 LIN28AP1-201ENST00000429574 405 ntBASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 ECEL1P2-202ENST00000465689 757 ntBASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV5A0A0B4J1U4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 TERF1P1-201ENST00000311003 1181 ntBASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 CCR12P-201ENST00000446203 998 ntBASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 AC116562.4-202ENST00000641738 218 ntBASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRGV5A0A0B4J1U4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.37■□□□□ 0.37
TRGV5A0A0B4J1U4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRGV5A0A0B4J1U4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TRGV5A0A0B4J1U4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
TRGV5A0A0B4J1U4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.37■□□□□ 0.37
TRGV5A0A0B4J1U4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRGV5A0A0B4J1U4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.37■□□□□ 0.37
TRGV5A0A0B4J1U4 KRT18P57-201ENST00000443599 1254 ntBASIC17.37■□□□□ 0.37
TRGV5A0A0B4J1U4 ATP5G1P1-201ENST00000448724 379 ntBASIC17.37■□□□□ 0.37
TRGV5A0A0B4J1U4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.37■□□□□ 0.37
TRGV5A0A0B4J1U4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRGV5A0A0B4J1U4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRGV5A0A0B4J1U4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.37■□□□□ 0.37
TRGV5A0A0B4J1U4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRGV5A0A0B4J1U4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRGV5A0A0B4J1U4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.37■□□□□ 0.37
TRGV5A0A0B4J1U4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.37■□□□□ 0.37
TRGV5A0A0B4J1U4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.37■□□□□ 0.37
TRGV5A0A0B4J1U4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.37■□□□□ 0.37
TRGV5A0A0B4J1U4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRGV5A0A0B4J1U4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRGV5A0A0B4J1U4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.36■□□□□ 0.37
TRGV5A0A0B4J1U4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRGV5A0A0B4J1U4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRGV5A0A0B4J1U4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.36■□□□□ 0.37
TRGV5A0A0B4J1U4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRGV5A0A0B4J1U4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRGV5A0A0B4J1U4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms