Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AC007938.2-201ENST00000604666 2634 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC00561-201ENST00000565815 2738 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AC020656.2-201ENST00000613291 5309 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 Y_RNA.77-201ENST00000362962 107 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 Y_RNA.408-201ENST00000383987 102 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 MIR223-201ENST00000385204 110 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 RPS3AP26-201ENST00000398259 784 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 MIR1284-201ENST00000408337 120 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 SLC35E1P1-201ENST00000419313 864 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 IPMKP1-201ENST00000425988 855 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 HSPD1P12-201ENST00000429127 1069 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AC010881.1-201ENST00000433830 235 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AC096775.1-201ENST00000437724 448 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 CNOT7P2-201ENST00000441051 832 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 EEF1A1P1-201ENST00000447052 739 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AC239809.1-201ENST00000450470 217 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 RN7SL197P-201ENST00000466981 299 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 RN7SL51P-201ENST00000468230 285 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 UBA52P7-201ENST00000486088 380 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AC090638.1-201ENST00000498296 909 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 OR5M14P-201ENST00000506803 618 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 HMGB1P44-201ENST00000508597 572 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AC117532.1-201ENST00000514638 323 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 RNU6-202P-201ENST00000515998 96 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 RNA5SP92-201ENST00000516437 110 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AC078899.1-201ENST00000521432 1185 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 SLC2A13P1-201ENST00000531560 322 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AL121594.2-201ENST00000541658 472 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 HAUS8P1-201ENST00000549005 542 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 LSM3P2-201ENST00000551246 273 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AL049779.2-201ENST00000553847 315 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AL512347.1-201ENST00000566420 503 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 MRPS21P7-201ENST00000566937 238 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AP005262.1-201ENST00000582646 997 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 OR2AS2P-201ENST00000606902 342 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 AC118658.2-201ENST00000618697 459 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 CASC19-222ENST00000641321 1173 ntBASIC5.4□□□□□ -1.54
PCDHGA3Q9Y5H0 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHGA3Q9Y5H0 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.4□□□□□ -1.55
PCDHGA3Q9Y5H0 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHGA3Q9Y5H0 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHGA3Q9Y5H0 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
PCDHGA3Q9Y5H0 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.4□□□□□ -1.55
PCDHGA3Q9Y5H0 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHGA3Q9Y5H0 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHGA3Q9Y5H0 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHGA3Q9Y5H0 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHGA3Q9Y5H0 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHGA3Q9Y5H0 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHGA3Q9Y5H0 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms