Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC018529.3-201ENST00000624212 2254 ntBASIC4.81□□□□□ -1.64
GPC3P51654 AC105074.1-201ENST00000623380 3095 ntBASIC4.81□□□□□ -1.64
GPC3P51654 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.81□□□□□ -1.64
GPC3P51654 MFSD8-220ENST00000641243 1422 ntBASIC4.81□□□□□ -1.64
GPC3P51654 AL133243.3-201ENST00000617415 3004 ntBASIC4.81□□□□□ -1.64
GPC3P51654 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
GPC3P51654 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.81□□□□□ -1.64
GPC3P51654 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GPC3P51654 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
GPC3P51654 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GPC3P51654 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
GPC3P51654 RNU1-44P-201ENST00000384453 163 ntBASIC4.81□□□□□ -1.64
GPC3P51654 RNA5SP372-201ENST00000390836 115 ntBASIC4.81□□□□□ -1.64
GPC3P51654 AL583835.1-201ENST00000399570 407 ntBASIC4.81□□□□□ -1.64
GPC3P51654 AC244453.4-201ENST00000419150 388 ntBASIC4.81□□□□□ -1.64
GPC3P51654 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.81□□□□□ -1.64
GPC3P51654 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GPC3P51654 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.81□□□□□ -1.64
GPC3P51654 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.81□□□□□ -1.64
GPC3P51654 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.81□□□□□ -1.64
GPC3P51654 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GPC3P51654 VN1R32P-201ENST00000452234 905 ntBASIC4.81□□□□□ -1.64
GPC3P51654 AC009963.2-201ENST00000453431 138 ntBASIC4.81□□□□□ -1.64
GPC3P51654 DDX39BP2-208ENST00000453923 258 ntBASIC4.81□□□□□ -1.64
GPC3P51654 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.81□□□□□ -1.64
GPC3P51654 RPL7P48-201ENST00000461513 746 ntBASIC4.81□□□□□ -1.64
GPC3P51654 RPL35P6-201ENST00000490024 372 ntBASIC4.81□□□□□ -1.64
GPC3P51654 RN7SL812P-201ENST00000493791 279 ntBASIC4.81□□□□□ -1.64
GPC3P51654 PPM1AP1-201ENST00000502740 1135 ntBASIC4.81□□□□□ -1.64
GPC3P51654 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.81□□□□□ -1.64
GPC3P51654 ATP1B1P1-201ENST00000509767 915 ntBASIC4.81□□□□□ -1.64
GPC3P51654 PARP4P3-201ENST00000510265 317 ntBASIC4.81□□□□□ -1.64
GPC3P51654 HMGB3P13-201ENST00000511263 607 ntBASIC4.81□□□□□ -1.64
GPC3P51654 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.81□□□□□ -1.64
GPC3P51654 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.81□□□□□ -1.64
GPC3P51654 AC090819.1-201ENST00000523800 1111 ntBASIC4.81□□□□□ -1.64
GPC3P51654 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.81□□□□□ -1.64
GPC3P51654 OR5BC1P-201ENST00000529327 739 ntBASIC4.81□□□□□ -1.64
GPC3P51654 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.81□□□□□ -1.64
GPC3P51654 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.81□□□□□ -1.64
GPC3P51654 AC023158.1-201ENST00000561632 1025 ntBASIC4.81□□□□□ -1.64
GPC3P51654 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.81□□□□□ -1.64
GPC3P51654 AC090525.3-201ENST00000605601 189 ntBASIC4.81□□□□□ -1.64
GPC3P51654 AC010857.1-201ENST00000606398 594 ntBASIC4.81□□□□□ -1.64
GPC3P51654 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.81□□□□□ -1.64
GPC3P51654 AL096803.3-201ENST00000609032 532 ntBASIC4.81□□□□□ -1.64
GPC3P51654 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.81□□□□□ -1.64
GPC3P51654 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.81□□□□□ -1.64
GPC3P51654 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GPC3P51654 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GPC3P51654 AC017002.4-201ENST00000604721 1525 ntBASIC4.81□□□□□ -1.64
GPC3P51654 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.81□□□□□ -1.64
GPC3P51654 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GPC3P51654 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GPC3P51654 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GPC3P51654 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GPC3P51654 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
GPC3P51654 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
GPC3P51654 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
GPC3P51654 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.8□□□□□ -1.64
GPC3P51654 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.8□□□□□ -1.64
GPC3P51654 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GPC3P51654 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GPC3P51654 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.8□□□□□ -1.64
GPC3P51654 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GPC3P51654 AC074029.4-201ENST00000624796 1859 ntBASIC4.8□□□□□ -1.64
GPC3P51654 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
GPC3P51654 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GPC3P51654 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
GPC3P51654 AL121657.1-201ENST00000327215 531 ntBASIC4.8□□□□□ -1.64
GPC3P51654 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GPC3P51654 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
GPC3P51654 MIR383-201ENST00000362257 73 ntBASIC4.8□□□□□ -1.64
GPC3P51654 RNA5SP22-201ENST00000365393 109 ntBASIC4.8□□□□□ -1.64
GPC3P51654 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
GPC3P51654 AC097374.1-203ENST00000400783 485 ntBASIC4.8□□□□□ -1.64
GPC3P51654 RPS27AP11-201ENST00000402798 447 ntBASIC4.8□□□□□ -1.64
GPC3P51654 AL078604.1-201ENST00000404609 466 ntBASIC4.8□□□□□ -1.64
GPC3P51654 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.8□□□□□ -1.64
GPC3P51654 AC009237.10-201ENST00000414112 510 ntBASIC4.8□□□□□ -1.64
GPC3P51654 SEC63P1-201ENST00000425785 1258 ntBASIC4.8□□□□□ -1.64
GPC3P51654 RPS27AP12-201ENST00000429552 465 ntBASIC4.8□□□□□ -1.64
GPC3P51654 AL031663.1-201ENST00000437445 219 ntBASIC4.8□□□□□ -1.64
GPC3P51654 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.8□□□□□ -1.64
GPC3P51654 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.8□□□□□ -1.64
GPC3P51654 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.8□□□□□ -1.64
GPC3P51654 RPL7P19-201ENST00000469948 618 ntBASIC4.8□□□□□ -1.64
GPC3P51654 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.8□□□□□ -1.64
GPC3P51654 HMGB3P14-201ENST00000494195 599 ntBASIC4.8□□□□□ -1.64
GPC3P51654 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.8□□□□□ -1.64
GPC3P51654 HMGB1P3-201ENST00000502802 616 ntBASIC4.8□□□□□ -1.64
GPC3P51654 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.8□□□□□ -1.64
GPC3P51654 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.8□□□□□ -1.64
GPC3P51654 AC008958.1-201ENST00000511047 682 ntBASIC4.8□□□□□ -1.64
GPC3P51654 SNORD116-26-201ENST00000516006 96 ntBASIC4.8□□□□□ -1.64
GPC3P51654 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.8□□□□□ -1.64
GPC3P51654 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GPC3P51654 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.8□□□□□ -1.64
GPC3P51654 RPL23AP97-201ENST00000568955 471 ntBASIC4.8□□□□□ -1.64
GPC3P51654 MIR3160-1-201ENST00000577972 85 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms