Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
EPHA3P29320 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
EPHA3P29320 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
EPHA3P29320 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
EPHA3P29320 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
EPHA3P29320 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.96□□□□□ -1.61
EPHA3P29320 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.61
EPHA3P29320 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
EPHA3P29320 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.96□□□□□ -1.62
EPHA3P29320 CASC19-221ENST00000641309 1382 ntBASIC4.96□□□□□ -1.62
EPHA3P29320 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
EPHA3P29320 RNU6-839P-201ENST00000363347 108 ntBASIC4.96□□□□□ -1.62
EPHA3P29320 RNU6-553P-201ENST00000364047 96 ntBASIC4.96□□□□□ -1.62
EPHA3P29320 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.96□□□□□ -1.62
EPHA3P29320 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
EPHA3P29320 RNU6-1200P-201ENST00000384162 107 ntBASIC4.96□□□□□ -1.62
EPHA3P29320 RNU2-42P-201ENST00000410697 113 ntBASIC4.96□□□□□ -1.62
EPHA3P29320 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.96□□□□□ -1.62
EPHA3P29320 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.96□□□□□ -1.62
EPHA3P29320 PPIAP17-201ENST00000438507 471 ntBASIC4.96□□□□□ -1.62
EPHA3P29320 ISCA1P2-201ENST00000438679 421 ntBASIC4.96□□□□□ -1.62
EPHA3P29320 RPS29P10-201ENST00000439197 166 ntBASIC4.96□□□□□ -1.62
EPHA3P29320 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.96□□□□□ -1.62
EPHA3P29320 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
EPHA3P29320 AL606662.1-201ENST00000445763 553 ntBASIC4.96□□□□□ -1.62
EPHA3P29320 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.96□□□□□ -1.62
EPHA3P29320 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.96□□□□□ -1.62
EPHA3P29320 AC092754.2-201ENST00000463506 460 ntBASIC4.96□□□□□ -1.62
EPHA3P29320 RPL5P24-201ENST00000463742 885 ntBASIC4.96□□□□□ -1.62
EPHA3P29320 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
EPHA3P29320 OR2A20P-203ENST00000498397 1268 ntBASIC4.96□□□□□ -1.62
EPHA3P29320 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.96□□□□□ -1.62
EPHA3P29320 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
EPHA3P29320 AC048346.1-201ENST00000510247 144 ntBASIC4.96□□□□□ -1.62
EPHA3P29320 MTND1P22-201ENST00000510572 951 ntBASIC4.96□□□□□ -1.62
EPHA3P29320 RNU6-1225P-201ENST00000516336 65 ntBASIC4.96□□□□□ -1.62
EPHA3P29320 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.96□□□□□ -1.62
EPHA3P29320 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.96□□□□□ -1.62
EPHA3P29320 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
EPHA3P29320 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.96□□□□□ -1.62
EPHA3P29320 UBE2NP1-201ENST00000545592 458 ntBASIC4.96□□□□□ -1.62
EPHA3P29320 GTF2IP8-201ENST00000560687 584 ntBASIC4.96□□□□□ -1.62
EPHA3P29320 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.96□□□□□ -1.62
EPHA3P29320 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.96□□□□□ -1.62
EPHA3P29320 AC005951.1-201ENST00000576706 485 ntBASIC4.96□□□□□ -1.62
EPHA3P29320 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.96□□□□□ -1.62
EPHA3P29320 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
EPHA3P29320 MIR4505-201ENST00000582238 73 ntBASIC4.96□□□□□ -1.62
EPHA3P29320 VN1R90P-201ENST00000595717 726 ntBASIC4.96□□□□□ -1.62
EPHA3P29320 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.96□□□□□ -1.62
EPHA3P29320 AC010738.1-201ENST00000604970 987 ntBASIC4.96□□□□□ -1.62
EPHA3P29320 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
EPHA3P29320 AC073530.2-201ENST00000623987 261 ntBASIC4.96□□□□□ -1.62
EPHA3P29320 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.96□□□□□ -1.62
EPHA3P29320 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
EPHA3P29320 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
EPHA3P29320 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
EPHA3P29320 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
EPHA3P29320 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
EPHA3P29320 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
EPHA3P29320 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.96□□□□□ -1.62
EPHA3P29320 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.96□□□□□ -1.62
EPHA3P29320 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
EPHA3P29320 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.95□□□□□ -1.62
EPHA3P29320 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
EPHA3P29320 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.95□□□□□ -1.62
EPHA3P29320 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.95□□□□□ -1.62
EPHA3P29320 MAPK10-349ENST00000641767 3661 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
EPHA3P29320 AC005539.1-201ENST00000443768 1479 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
EPHA3P29320 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.95□□□□□ -1.62
EPHA3P29320 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
EPHA3P29320 PCAT14-202ENST00000627127 3935 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.95□□□□□ -1.62
EPHA3P29320 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
EPHA3P29320 U3.3-201ENST00000362986 216 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 RN7SKP292-201ENST00000365522 317 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
EPHA3P29320 Y_RNA.436-201ENST00000384097 102 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
EPHA3P29320 HNRNPDP2-201ENST00000406475 478 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.95□□□□□ -1.62
EPHA3P29320 AC019050.1-201ENST00000418508 492 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 AC012519.1-201ENST00000424588 610 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.95□□□□□ -1.62
EPHA3P29320 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.95□□□□□ -1.62
EPHA3P29320 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.95□□□□□ -1.62
EPHA3P29320 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.95□□□□□ -1.62
EPHA3P29320 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.95□□□□□ -1.62
EPHA3P29320 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
EPHA3P29320 ELOCP8-201ENST00000439309 332 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 ELOCP15-201ENST00000442090 332 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 EEF1B2P5-201ENST00000444820 548 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.95□□□□□ -1.62
EPHA3P29320 RPL12P26-201ENST00000452430 487 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.95□□□□□ -1.62
EPHA3P29320 PNPLA4P1-201ENST00000458328 305 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 RPL31P3-201ENST00000458430 332 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 AC027308.1-201ENST00000517993 110 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms