Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 MFSD8-219ENST00000641228 2559 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 RNU6-1066P-201ENST00000363573 105 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 Y_RNA.450-201ENST00000384198 113 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 RNU1-77P-201ENST00000390868 162 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 RNU6ATAC18P-201ENST00000408413 101 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 Y_RNA.625-201ENST00000411256 107 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 SLC35E1P1-201ENST00000419313 864 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 SKP1P3-201ENST00000429280 487 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 CYCSP6-201ENST00000434498 302 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 AC011742.2-201ENST00000443818 352 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 YWHAQP9-201ENST00000445891 512 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 DPPA3P1-201ENST00000448050 469 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 AC015724.1-201ENST00000478577 156 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 AC072052.1-201ENST00000496556 306 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 MIR2117-201ENST00000516780 80 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 OR5AK1P-201ENST00000524837 922 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 AP001189.2-201ENST00000527320 189 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 AL049779.2-201ENST00000553847 315 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 AC096996.1-201ENST00000563813 325 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 AC022432.1-201ENST00000595739 310 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 AC106028.5-201ENST00000610332 395 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 AL121612.2-201ENST00000612261 482 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 AC015871.5-202ENST00000623252 701 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 AC132068.1-201ENST00000623805 459 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 VPS35P1-201ENST00000563400 1518 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 AL355377.1-201ENST00000621125 1653 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 AL161912.4-201ENST00000623889 2468 ntBASIC7.66□□□□□ -1.18
CSB-PGBD3P0DP91 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 RNU4-2-201ENST00000365668 141 ntBASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 HMGB3P7-201ENST00000400214 611 ntBASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 AL513174.1-201ENST00000423182 629 ntBASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 AC019185.1-201ENST00000442718 389 ntBASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 AL450023.1-201ENST00000450868 751 ntBASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 DNAJB5P1-201ENST00000454004 806 ntBASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 UBTFL6-201ENST00000477929 1024 ntBASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 AL161747.1-201ENST00000480068 358 ntBASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 RN7SL570P-201ENST00000484405 292 ntBASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 RPL38P3-201ENST00000484463 213 ntBASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 AC108471.1-201ENST00000513977 287 ntBASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 MTCO1P35-201ENST00000515270 228 ntBASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 MIR132-201ENST00000591554 101 ntBASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 LINC01739-205ENST00000641890 573 ntBASIC7.65□□□□□ -1.18
CSB-PGBD3P0DP91 AL591135.1-201ENST00000401578 5914 ntBASIC7.65□□□□□ -1.19
CSB-PGBD3P0DP91 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.65□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms