Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 CDH12P2-201ENST00000504393 298 ntBASIC4.13□□□□□ -1.75
HCN1O60741 VWA8P1-201ENST00000510889 176 ntBASIC4.13□□□□□ -1.75
HCN1O60741 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.13□□□□□ -1.75
HCN1O60741 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.13□□□□□ -1.75
HCN1O60741 RNU6-889P-201ENST00000517189 103 ntBASIC4.13□□□□□ -1.75
HCN1O60741 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.13□□□□□ -1.75
HCN1O60741 IFITM8P-201ENST00000522529 394 ntBASIC4.13□□□□□ -1.75
HCN1O60741 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.13□□□□□ -1.75
HCN1O60741 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.13□□□□□ -1.75
HCN1O60741 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HCN1O60741 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.13□□□□□ -1.75
HCN1O60741 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
HCN1O60741 AL133247.2-201ENST00000603236 482 ntBASIC4.13□□□□□ -1.75
HCN1O60741 AC103792.1-201ENST00000603591 919 ntBASIC4.13□□□□□ -1.75
HCN1O60741 AP004372.1-201ENST00000604842 844 ntBASIC4.13□□□□□ -1.75
HCN1O60741 AC015802.5-201ENST00000607478 399 ntBASIC4.13□□□□□ -1.75
HCN1O60741 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.13□□□□□ -1.75
HCN1O60741 AL096803.3-201ENST00000609032 532 ntBASIC4.13□□□□□ -1.75
HCN1O60741 AC012409.3-201ENST00000611343 981 ntBASIC4.13□□□□□ -1.75
HCN1O60741 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.13□□□□□ -1.75
HCN1O60741 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.13□□□□□ -1.75
HCN1O60741 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HCN1O60741 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.13□□□□□ -1.75
HCN1O60741 SPATA2P1-201ENST00000431223 2055 ntBASIC4.13□□□□□ -1.75
HCN1O60741 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HCN1O60741 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
HCN1O60741 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HCN1O60741 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
HCN1O60741 AC007390.2-201ENST00000606229 3803 ntBASIC4.13□□□□□ -1.75
HCN1O60741 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HCN1O60741 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
HCN1O60741 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
HCN1O60741 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HCN1O60741 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.12□□□□□ -1.75
HCN1O60741 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HCN1O60741 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HCN1O60741 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HCN1O60741 RNA5SP513-201ENST00000364648 118 ntBASIC4.12□□□□□ -1.75
HCN1O60741 RNA5SP151-201ENST00000365632 117 ntBASIC4.12□□□□□ -1.75
HCN1O60741 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
HCN1O60741 RNU1-63P-201ENST00000383902 164 ntBASIC4.12□□□□□ -1.75
HCN1O60741 RNU6-31P-201ENST00000384388 108 ntBASIC4.12□□□□□ -1.75
HCN1O60741 U3.22-201ENST00000391120 215 ntBASIC4.12□□□□□ -1.75
HCN1O60741 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.12□□□□□ -1.75
HCN1O60741 UBTFL3-201ENST00000418934 1024 ntBASIC4.12□□□□□ -1.75
HCN1O60741 AL592293.2-201ENST00000422292 996 ntBASIC4.12□□□□□ -1.75
HCN1O60741 NDUFA5P10-201ENST00000432147 357 ntBASIC4.12□□□□□ -1.75
HCN1O60741 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.12□□□□□ -1.75
HCN1O60741 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.12□□□□□ -1.75
HCN1O60741 VN1R32P-201ENST00000452234 905 ntBASIC4.12□□□□□ -1.75
HCN1O60741 TPRKBP1-201ENST00000456243 481 ntBASIC4.12□□□□□ -1.75
HCN1O60741 AC092905.1-201ENST00000467527 949 ntBASIC4.12□□□□□ -1.75
HCN1O60741 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.12□□□□□ -1.75
HCN1O60741 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
HCN1O60741 S100A11P1-201ENST00000477525 312 ntBASIC4.12□□□□□ -1.75
HCN1O60741 UBTFL6-201ENST00000477929 1024 ntBASIC4.12□□□□□ -1.75
HCN1O60741 AC093267.1-201ENST00000489176 961 ntBASIC4.12□□□□□ -1.75
HCN1O60741 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HCN1O60741 RNA5SP497-201ENST00000516081 97 ntBASIC4.12□□□□□ -1.75
HCN1O60741 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.12□□□□□ -1.75
HCN1O60741 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.12□□□□□ -1.75
HCN1O60741 AC136624.4-201ENST00000573044 370 ntBASIC4.12□□□□□ -1.75
HCN1O60741 MIR4512-201ENST00000583257 77 ntBASIC4.12□□□□□ -1.75
HCN1O60741 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.12□□□□□ -1.75
HCN1O60741 AC090948.1-201ENST00000607464 549 ntBASIC4.12□□□□□ -1.75
HCN1O60741 AP002360.3-201ENST00000607673 710 ntBASIC4.12□□□□□ -1.75
HCN1O60741 AC083809.1-201ENST00000615051 472 ntBASIC4.12□□□□□ -1.75
HCN1O60741 LINC01808-202ENST00000641680 1116 ntBASIC4.12□□□□□ -1.75
HCN1O60741 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.12□□□□□ -1.75
HCN1O60741 NXPH1-205ENST00000602349 1953 ntBASIC4.12□□□□□ -1.75
HCN1O60741 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HCN1O60741 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HCN1O60741 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.12□□□□□ -1.75
HCN1O60741 AC012020.1-201ENST00000624541 1728 ntBASIC4.12□□□□□ -1.75
HCN1O60741 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.12□□□□□ -1.75
HCN1O60741 AC011266.1-201ENST00000624119 3569 ntBASIC4.12□□□□□ -1.75
HCN1O60741 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.11□□□□□ -1.75
HCN1O60741 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HCN1O60741 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HCN1O60741 AC097504.1-201ENST00000515103 2415 ntBASIC4.11□□□□□ -1.75
HCN1O60741 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HCN1O60741 AC126755.2-208ENST00000327792 462 ntBASIC4.11□□□□□ -1.75
HCN1O60741 AC138969.1-213ENST00000331436 462 ntBASIC4.11□□□□□ -1.75
HCN1O60741 RPL32P3-201ENST00000359025 275 ntBASIC4.11□□□□□ -1.75
HCN1O60741 SNORA70.2-201ENST00000364506 135 ntBASIC4.11□□□□□ -1.75
HCN1O60741 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HCN1O60741 MIR513A2-201ENST00000385249 127 ntBASIC4.11□□□□□ -1.75
HCN1O60741 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HCN1O60741 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HCN1O60741 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HCN1O60741 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HCN1O60741 AL078604.1-201ENST00000404609 466 ntBASIC4.11□□□□□ -1.75
HCN1O60741 RNA5SP39-201ENST00000411245 120 ntBASIC4.11□□□□□ -1.75
HCN1O60741 P2RY10P2-201ENST00000416730 913 ntBASIC4.11□□□□□ -1.75
HCN1O60741 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.11□□□□□ -1.75
HCN1O60741 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.11□□□□□ -1.75
HCN1O60741 RPL7AP25-201ENST00000423357 805 ntBASIC4.11□□□□□ -1.75
HCN1O60741 AL732292.1-201ENST00000426692 226 ntBASIC4.11□□□□□ -1.75
HCN1O60741 AC011998.1-201ENST00000433403 117 ntBASIC4.11□□□□□ -1.75
HCN1O60741 AC091390.1-201ENST00000433904 331 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms