Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 CCT8P1-201ENST00000413611 1657 ntBASIC4.29□□□□□ -1.72
LRRTM2O43300 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LRRTM2O43300 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRRTM2O43300 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
LRRTM2O43300 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRRTM2O43300 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.28□□□□□ -1.72
LRRTM2O43300 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.28□□□□□ -1.72
LRRTM2O43300 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRRTM2O43300 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRRTM2O43300 MIR708-201ENST00000390708 88 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 RNU6-244P-201ENST00000391028 104 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.28□□□□□ -1.72
LRRTM2O43300 RNU2-72P-201ENST00000411175 163 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 UQCRBP1-201ENST00000421129 336 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LRRTM2O43300 PDSS1P1-201ENST00000422953 1114 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 MORF4L1P7-201ENST00000426038 703 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 RPL17P35-201ENST00000432217 549 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.28□□□□□ -1.72
LRRTM2O43300 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.28□□□□□ -1.72
LRRTM2O43300 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.28□□□□□ -1.72
LRRTM2O43300 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.28□□□□□ -1.72
LRRTM2O43300 AC074367.1-201ENST00000438685 1125 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LRRTM2O43300 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.28□□□□□ -1.72
LRRTM2O43300 EIF2S2P5-201ENST00000457635 968 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 AC090543.1-201ENST00000492168 485 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
LRRTM2O43300 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LRRTM2O43300 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.28□□□□□ -1.72
LRRTM2O43300 CYCSP28-201ENST00000534284 321 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
LRRTM2O43300 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.28□□□□□ -1.72
LRRTM2O43300 MIR4458-201ENST00000578872 75 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 RN7SL176P-201ENST00000580352 264 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 AC011477.5-201ENST00000586571 259 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.28□□□□□ -1.72
LRRTM2O43300 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LRRTM2O43300 AC010680.3-201ENST00000604215 520 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 AL049844.2-201ENST00000604280 628 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 COX6CP4-201ENST00000605798 228 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 AC242628.1-201ENST00000606810 391 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 AC010424.2-201ENST00000607594 443 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 OR6R2P-201ENST00000609216 300 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 AC024941.1-201ENST00000612250 334 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 AL121890.3-201ENST00000618494 516 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 AC097372.4-201ENST00000625025 466 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 AL049536.1-201ENST00000625043 744 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LRRTM2O43300 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.28□□□□□ -1.72
LRRTM2O43300 EOGT-210ENST00000615922 1931 ntBASIC4.28□□□□□ -1.72
LRRTM2O43300 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRRTM2O43300 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LRRTM2O43300 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.28□□□□□ -1.72
LRRTM2O43300 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRRTM2O43300 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.27□□□□□ -1.73
LRRTM2O43300 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.27□□□□□ -1.73
LRRTM2O43300 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LRRTM2O43300 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
LRRTM2O43300 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.27□□□□□ -1.73
LRRTM2O43300 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.27□□□□□ -1.73
LRRTM2O43300 OR56B2P-202ENST00000641377 2453 ntBASIC4.27□□□□□ -1.73
LRRTM2O43300 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.27□□□□□ -1.73
LRRTM2O43300 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRRTM2O43300 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRRTM2O43300 RNU1-94P-201ENST00000362627 173 ntBASIC4.27□□□□□ -1.73
LRRTM2O43300 RNA5SP509-201ENST00000364577 119 ntBASIC4.27□□□□□ -1.73
LRRTM2O43300 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.27□□□□□ -1.73
LRRTM2O43300 AL121834.1-202ENST00000404494 277 ntBASIC4.27□□□□□ -1.73
LRRTM2O43300 HDGFP1-201ENST00000405943 252 ntBASIC4.27□□□□□ -1.73
LRRTM2O43300 AL080315.1-201ENST00000406055 466 ntBASIC4.27□□□□□ -1.73
LRRTM2O43300 MTND4P24-201ENST00000424002 397 ntBASIC4.27□□□□□ -1.73
LRRTM2O43300 RPS27AP12-201ENST00000429552 465 ntBASIC4.27□□□□□ -1.73
LRRTM2O43300 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.27□□□□□ -1.73
LRRTM2O43300 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.27□□□□□ -1.73
LRRTM2O43300 AL627224.1-201ENST00000448334 444 ntBASIC4.27□□□□□ -1.73
LRRTM2O43300 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.27□□□□□ -1.73
LRRTM2O43300 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.27□□□□□ -1.73
LRRTM2O43300 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.27□□□□□ -1.73
LRRTM2O43300 HMGB3P13-201ENST00000511263 607 ntBASIC4.27□□□□□ -1.73
LRRTM2O43300 AC093770.1-201ENST00000511559 571 ntBASIC4.27□□□□□ -1.73
LRRTM2O43300 AC007016.1-201ENST00000512110 244 ntBASIC4.27□□□□□ -1.73
LRRTM2O43300 AC108120.2-201ENST00000512973 294 ntBASIC4.27□□□□□ -1.73
LRRTM2O43300 MTCO1P35-201ENST00000515270 228 ntBASIC4.27□□□□□ -1.73
LRRTM2O43300 AC016550.3-201ENST00000515706 767 ntBASIC4.27□□□□□ -1.73
LRRTM2O43300 RNU6-709P-201ENST00000517257 104 ntBASIC4.27□□□□□ -1.73
LRRTM2O43300 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRRTM2O43300 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.27□□□□□ -1.73
LRRTM2O43300 CKS1BP1-201ENST00000555221 240 ntBASIC4.27□□□□□ -1.73
LRRTM2O43300 AL049839.1-201ENST00000556151 657 ntBASIC4.27□□□□□ -1.73
LRRTM2O43300 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.27□□□□□ -1.73
LRRTM2O43300 ABI1P1-201ENST00000603375 1120 ntBASIC4.27□□□□□ -1.73
LRRTM2O43300 AC091979.2-201ENST00000607514 214 ntBASIC4.27□□□□□ -1.73
LRRTM2O43300 AL136370.1-201ENST00000608166 691 ntBASIC4.27□□□□□ -1.73
LRRTM2O43300 AC023043.4-201ENST00000612081 449 ntBASIC4.27□□□□□ -1.73
LRRTM2O43300 OR2L1P-202ENST00000641567 1023 ntBASIC4.27□□□□□ -1.73
LRRTM2O43300 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LRRTM2O43300 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
LRRTM2O43300 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms