Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CTDP1Q9Y5B0 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
CTDP1Q9Y5B0 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CTDP1Q9Y5B0 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CTDP1Q9Y5B0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CTDP1Q9Y5B0 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
CTDP1Q9Y5B0 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.96□□□□□ -1.45
CTDP1Q9Y5B0 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CTDP1Q9Y5B0 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CTDP1Q9Y5B0 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CTDP1Q9Y5B0 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.96□□□□□ -1.45
CTDP1Q9Y5B0 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.96□□□□□ -1.45
CTDP1Q9Y5B0 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.96□□□□□ -1.45
CTDP1Q9Y5B0 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CTDP1Q9Y5B0 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.96□□□□□ -1.45
CTDP1Q9Y5B0 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.96□□□□□ -1.45
CTDP1Q9Y5B0 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.96□□□□□ -1.45
CTDP1Q9Y5B0 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
CTDP1Q9Y5B0 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
CTDP1Q9Y5B0 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 OR9G4-201ENST00000302957 984 ntBASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 RNU4-44P-201ENST00000363050 141 ntBASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 RNA5SP223-201ENST00000365174 120 ntBASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 DNAJC19P6-201ENST00000401853 280 ntBASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 C1DP1-201ENST00000426049 402 ntBASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 HSPE1P16-201ENST00000426640 348 ntBASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 DLGAP5P1-201ENST00000430307 464 ntBASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 AL353706.1-201ENST00000436728 494 ntBASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 AC009961.3-201ENST00000449832 765 ntBASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 RN7SL197P-201ENST00000466981 299 ntBASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 AC107401.1-201ENST00000503426 685 ntBASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 FABP5P12-201ENST00000515543 389 ntBASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 AC012213.3-201ENST00000577199 777 ntBASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 AC104785.1-201ENST00000603220 588 ntBASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 AC008814.1-201ENST00000603797 406 ntBASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 AC021749.1-201ENST00000604322 607 ntBASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 AL121890.3-201ENST00000618494 516 ntBASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CTDP1Q9Y5B0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 RN7SKP113-201ENST00000363891 295 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 SNORD116.1-201ENST00000365628 92 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 RPS3AP26-201ENST00000398259 784 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 AL021407.1-201ENST00000404531 386 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 RNU4-74P-201ENST00000411280 161 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 COX6B1P1-201ENST00000415962 213 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 AC023128.2-201ENST00000420880 1223 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 AC098826.1-201ENST00000433943 471 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 CYCSP11-201ENST00000436426 315 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 MTCO2P16-201ENST00000436962 677 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 FHP1-201ENST00000442741 703 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 AL592437.1-201ENST00000443781 492 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 NPM1P13-201ENST00000452663 865 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms