Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.79□□□□□ -1.8
CHD8Q9HCK8 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC3.79□□□□□ -1.8
CHD8Q9HCK8 CYCSP40-201ENST00000575927 294 ntBASIC3.79□□□□□ -1.8
CHD8Q9HCK8 MIR4435-1-201ENST00000582552 80 ntBASIC3.79□□□□□ -1.8
CHD8Q9HCK8 AL137849.1-201ENST00000604767 169 ntBASIC3.79□□□□□ -1.8
CHD8Q9HCK8 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.79□□□□□ -1.8
CHD8Q9HCK8 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHD8Q9HCK8 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.79□□□□□ -1.8
CHD8Q9HCK8 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 AC026367.3-201ENST00000619032 590 ntBASIC3.78□□□□□ -1.8
CHD8Q9HCK8 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 LYST-202ENST00000389794 12985 ntTSL 5 BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 SNORD3H-201ENST00000384486 214 ntBASIC3.78□□□□□ -1.8
CHD8Q9HCK8 SNORA48.8-201ENST00000391324 134 ntBASIC3.78□□□□□ -1.8
CHD8Q9HCK8 AC007066.1-201ENST00000392902 381 ntBASIC3.78□□□□□ -1.8
CHD8Q9HCK8 AC127537.2-201ENST00000439258 465 ntBASIC3.78□□□□□ -1.8
CHD8Q9HCK8 SERPINA7P1-201ENST00000443077 631 ntBASIC3.78□□□□□ -1.8
CHD8Q9HCK8 RPS29P19-201ENST00000479709 171 ntBASIC3.78□□□□□ -1.8
CHD8Q9HCK8 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 RN7SKP18-201ENST00000516005 275 ntBASIC3.78□□□□□ -1.8
CHD8Q9HCK8 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 AC244505.7-201ENST00000599675 272 ntBASIC3.78□□□□□ -1.8
CHD8Q9HCK8 AC068790.5-201ENST00000602741 355 ntBASIC3.78□□□□□ -1.8
CHD8Q9HCK8 AC002069.2-201ENST00000603580 883 ntBASIC3.78□□□□□ -1.8
CHD8Q9HCK8 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC3.78□□□□□ -1.8
CHD8Q9HCK8 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
CHD8Q9HCK8 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CHD8Q9HCK8 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.77□□□□□ -1.81
CHD8Q9HCK8 SNORA80A-201ENST00000363922 136 ntBASIC3.77□□□□□ -1.81
CHD8Q9HCK8 SNORA3.3-201ENST00000408712 125 ntBASIC3.77□□□□□ -1.81
CHD8Q9HCK8 TRIM60P17-201ENST00000415181 719 ntBASIC3.77□□□□□ -1.81
CHD8Q9HCK8 EIF1P3-201ENST00000423841 334 ntBASIC3.77□□□□□ -1.81
CHD8Q9HCK8 MYL12BP2-201ENST00000503948 512 ntBASIC3.77□□□□□ -1.81
CHD8Q9HCK8 AC105031.1-201ENST00000518550 476 ntBASIC3.77□□□□□ -1.81
CHD8Q9HCK8 RPL23AP53-201ENST00000521854 457 ntBASIC3.77□□□□□ -1.81
CHD8Q9HCK8 AC124068.1-201ENST00000563131 678 ntBASIC3.77□□□□□ -1.81
CHD8Q9HCK8 AC015912.2-201ENST00000571053 181 ntBASIC3.77□□□□□ -1.81
CHD8Q9HCK8 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC3.77□□□□□ -1.81
CHD8Q9HCK8 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.77□□□□□ -1.81
CHD8Q9HCK8 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.77□□□□□ -1.81
CHD8Q9HCK8 MIR7843-201ENST00000622274 79 ntBASIC3.77□□□□□ -1.81
CHD8Q9HCK8 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.77□□□□□ -1.81
CHD8Q9HCK8 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
CHD8Q9HCK8 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CHD8Q9HCK8 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.77□□□□□ -1.81
CHD8Q9HCK8 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CHD8Q9HCK8 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CHD8Q9HCK8 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CHD8Q9HCK8 OR6K3-202ENST00000368146 996 ntBASIC3.77□□□□□ -1.81
CHD8Q9HCK8 SNORA54-201ENST00000384281 123 ntBASIC3.77□□□□□ -1.81
CHD8Q9HCK8 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.77□□□□□ -1.81
CHD8Q9HCK8 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC3.77□□□□□ -1.81
CHD8Q9HCK8 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.77□□□□□ -1.81
CHD8Q9HCK8 AC091178.1-203ENST00000584586 279 ntBASIC3.77□□□□□ -1.81
CHD8Q9HCK8 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CHD8Q9HCK8 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CHD8Q9HCK8 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CHD8Q9HCK8 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.77□□□□□ -1.81
CHD8Q9HCK8 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CHD8Q9HCK8 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CHD8Q9HCK8 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.77□□□□□ -1.81
CHD8Q9HCK8 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.77□□□□□ -1.81
CHD8Q9HCK8 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CHD8Q9HCK8 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CHD8Q9HCK8 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CHD8Q9HCK8 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CHD8Q9HCK8 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CHD8Q9HCK8 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.76□□□□□ -1.81
CHD8Q9HCK8 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CHD8Q9HCK8 PCAT14-202ENST00000627127 3935 ntBASIC3.76□□□□□ -1.81
CHD8Q9HCK8 RNA5SP307-201ENST00000362863 116 ntBASIC3.76□□□□□ -1.81
CHD8Q9HCK8 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.76□□□□□ -1.81
CHD8Q9HCK8 RPL23AP46-201ENST00000438548 490 ntBASIC3.76□□□□□ -1.81
CHD8Q9HCK8 NPM1P13-201ENST00000452663 865 ntBASIC3.76□□□□□ -1.81
CHD8Q9HCK8 AGGF1P3-201ENST00000493675 1213 ntBASIC3.76□□□□□ -1.81
CHD8Q9HCK8 AC078814.3-201ENST00000553036 491 ntBASIC3.76□□□□□ -1.81
CHD8Q9HCK8 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.76□□□□□ -1.81
CHD8Q9HCK8 AL390838.2-201ENST00000602394 274 ntBASIC3.76□□□□□ -1.81
CHD8Q9HCK8 AC006077.1-201ENST00000604746 343 ntBASIC3.76□□□□□ -1.81
CHD8Q9HCK8 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms