Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 CYCSP45-201ENST00000402289 315 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 RN7SKP151-201ENST00000410230 316 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 HMGA1P8-201ENST00000414130 321 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 AC009237.2-201ENST00000421358 284 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 FABP7P1-201ENST00000424004 391 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 RPL7P44-201ENST00000424827 742 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 YWHAEP5-201ENST00000431545 765 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 AC079922.1-201ENST00000443291 359 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 RPS4XP12-201ENST00000461747 709 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 AC079841.1-201ENST00000481228 950 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 AC004453.1-201ENST00000487895 408 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 AC090638.1-201ENST00000498296 909 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 Y_RNA.701-201ENST00000516812 110 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 AC096996.1-201ENST00000563813 325 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 PCMTD1P2-201ENST00000565017 355 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 MIR4666A-201ENST00000580160 79 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 MIR548AB-201ENST00000584917 84 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 MIR132-201ENST00000591554 101 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 AC005498.1-201ENST00000592125 465 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 AC090510.2-201ENST00000617465 629 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 AL158209.2-201ENST00000619266 216 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 AC132068.1-201ENST00000623805 459 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
TMEFF1Q8IYR6 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 AL161912.4-201ENST00000623889 2468 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 RNY4P14-201ENST00000363656 96 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 Y_RNA.162-201ENST00000363683 102 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 Y_RNA.263-201ENST00000364659 114 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 RNU1-77P-201ENST00000390868 162 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 RNA5SP105-201ENST00000391123 113 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 RPS3AP23-201ENST00000401762 784 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 GAPDHP42-201ENST00000406848 981 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 RN7SKP125-201ENST00000410481 302 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 RPL23AP27-201ENST00000415161 451 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 AL807761.1-201ENST00000417622 171 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 MTCO1P54-201ENST00000430139 712 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 CYCSP6-201ENST00000434498 302 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 ARPC3P1-201ENST00000437218 533 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 AL450263.2-201ENST00000439400 589 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 RPL12P3-201ENST00000440080 396 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 AC019185.1-201ENST00000442718 389 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 AC005002.1-201ENST00000447458 540 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 AL450023.1-201ENST00000450868 751 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 AC013828.1-201ENST00000481845 158 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 ACTG1P13-201ENST00000486987 1043 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 RPL15P21-201ENST00000495592 567 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 AC072052.1-201ENST00000496556 306 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 AC097173.1-201ENST00000505862 819 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 AC091133.4-201ENST00000511142 308 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 PTGES3P3-201ENST00000511479 482 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 MTCO1P35-201ENST00000515270 228 ntBASIC5.7□□□□□ -1.5
TMEFF1Q8IYR6 RN7SKP288-201ENST00000516227 268 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms