Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AC112694.2-201ENST00000623697 768 ntBASIC4.94□□□□□ -1.62
LRRTM4Q86VH4 MFSD8-245ENST00000641743 948 ntBASIC4.94□□□□□ -1.62
LRRTM4Q86VH4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.94□□□□□ -1.62
LRRTM4Q86VH4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LRRTM4Q86VH4 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LRRTM4Q86VH4 AC099786.3-201ENST00000565735 1410 ntBASIC4.94□□□□□ -1.62
LRRTM4Q86VH4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LRRTM4Q86VH4 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LRRTM4Q86VH4 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
LRRTM4Q86VH4 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LRRTM4Q86VH4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
LRRTM4Q86VH4 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.94□□□□□ -1.62
LRRTM4Q86VH4 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LRRTM4Q86VH4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.94□□□□□ -1.62
LRRTM4Q86VH4 AC021242.1-201ENST00000507315 2035 ntBASIC4.94□□□□□ -1.62
LRRTM4Q86VH4 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AC120338.1-201ENST00000625074 1541 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 RNU6-839P-201ENST00000363347 108 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AC019155.1-201ENST00000382242 574 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 SNORA70.10-201ENST00000384515 134 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 CHEK2P3-201ENST00000416118 248 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 RPS3AP37-201ENST00000419176 745 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 DPRXP1-201ENST00000426312 460 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 HMGN2P27-201ENST00000427352 270 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AL035246.1-201ENST00000433554 1255 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 Z80107.1-201ENST00000436830 412 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 RAB11AP1-201ENST00000442978 646 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 RPL7P59-201ENST00000447700 943 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AL645937.3-201ENST00000453647 936 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 RPS6P2-201ENST00000454208 705 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AC020898.1-201ENST00000474167 787 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 RNA5SP135-201ENST00000517019 125 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 NPM1P6-201ENST00000521088 871 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AC012339.2-201ENST00000523996 453 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AP001922.4-201ENST00000526967 290 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 OR5AZ1P-201ENST00000527448 943 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AP001317.1-201ENST00000531194 960 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AC006349.1-201ENST00000555526 235 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 SETP1-201ENST00000556014 845 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AC040958.1-201ENST00000561102 201 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AGGF1P6-201ENST00000569213 976 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AC011840.5-201ENST00000582125 771 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AC010503.3-201ENST00000594355 540 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AP003973.1-201ENST00000604639 691 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AC010857.1-201ENST00000606398 594 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AC106052.1-201ENST00000608029 497 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 AC008079.2-201ENST00000623543 20396 ntBASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
LRRTM4Q86VH4 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LRRTM4Q86VH4 MTND4P8-201ENST00000514997 1362 ntBASIC4.92□□□□□ -1.62
LRRTM4Q86VH4 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
LRRTM4Q86VH4 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
LRRTM4Q86VH4 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.92□□□□□ -1.62
LRRTM4Q86VH4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LRRTM4Q86VH4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
LRRTM4Q86VH4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
LRRTM4Q86VH4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
LRRTM4Q86VH4 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
LRRTM4Q86VH4 RNU6-707P-201ENST00000364647 95 ntBASIC4.92□□□□□ -1.62
LRRTM4Q86VH4 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LRRTM4Q86VH4 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.92□□□□□ -1.62
LRRTM4Q86VH4 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
LRRTM4Q86VH4 RNU6-1293P-201ENST00000384077 107 ntBASIC4.92□□□□□ -1.62
LRRTM4Q86VH4 RNU6-906P-201ENST00000384700 70 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms