Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL691482.1-201ENST00000453255 87 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 NAP1L1P3-201ENST00000462291 880 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 AC006967.1-201ENST00000467608 589 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 AC018635.1-201ENST00000468292 1030 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 AC108022.1-201ENST00000493466 478 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.3□□□□□ -1.72
SCN1BQ07699 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.3□□□□□ -1.72
SCN1BQ07699 SOD1P3-201ENST00000518682 454 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.3□□□□□ -1.72
SCN1BQ07699 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCN1BQ07699 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.3□□□□□ -1.72
SCN1BQ07699 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.3□□□□□ -1.72
SCN1BQ07699 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.3□□□□□ -1.72
SCN1BQ07699 DYNLL1P4-201ENST00000549314 266 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 CYB5AP5-201ENST00000549779 389 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.3□□□□□ -1.72
SCN1BQ07699 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.3□□□□□ -1.72
SCN1BQ07699 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.3□□□□□ -1.72
SCN1BQ07699 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.3□□□□□ -1.72
SCN1BQ07699 MIR4504-201ENST00000577413 92 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.3□□□□□ -1.72
SCN1BQ07699 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.3□□□□□ -1.72
SCN1BQ07699 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.3□□□□□ -1.72
SCN1BQ07699 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.3□□□□□ -1.72
SCN1BQ07699 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.3□□□□□ -1.72
SCN1BQ07699 OR6R2P-201ENST00000609216 300 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 MIR7154-201ENST00000620673 73 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.3□□□□□ -1.72
SCN1BQ07699 BX649567.1-201ENST00000642071 1134 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCN1BQ07699 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SCN1BQ07699 AL445487.1-201ENST00000415694 1580 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 AC025125.1-201ENST00000624743 1922 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCN1BQ07699 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCN1BQ07699 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SCN1BQ07699 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCN1BQ07699 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCN1BQ07699 EIF2AP4-201ENST00000424793 1781 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SCN1BQ07699 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SCN1BQ07699 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SCN1BQ07699 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SCN1BQ07699 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SCN1BQ07699 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SCN1BQ07699 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SCN1BQ07699 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SCN1BQ07699 OR10J6P-201ENST00000289731 930 ntBASIC4.29□□□□□ -1.72
SCN1BQ07699 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SCN1BQ07699 RNA5SP132-201ENST00000364725 118 ntBASIC4.29□□□□□ -1.72
SCN1BQ07699 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.29□□□□□ -1.72
SCN1BQ07699 NPM1P4-201ENST00000414095 812 ntBASIC4.29□□□□□ -1.72
SCN1BQ07699 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.29□□□□□ -1.72
SCN1BQ07699 RPL31P45-201ENST00000419532 356 ntBASIC4.29□□□□□ -1.72
SCN1BQ07699 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.29□□□□□ -1.72
SCN1BQ07699 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.29□□□□□ -1.72
SCN1BQ07699 AC010881.1-201ENST00000433830 235 ntBASIC4.29□□□□□ -1.72
SCN1BQ07699 RPS7P2-201ENST00000435134 607 ntBASIC4.29□□□□□ -1.72
SCN1BQ07699 AL450023.3-201ENST00000440592 271 ntBASIC4.29□□□□□ -1.72
SCN1BQ07699 AC011753.3-201ENST00000443436 406 ntBASIC4.29□□□□□ -1.72
SCN1BQ07699 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.29□□□□□ -1.72
SCN1BQ07699 RPL7P33-201ENST00000444159 742 ntBASIC4.29□□□□□ -1.72
SCN1BQ07699 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.29□□□□□ -1.72
SCN1BQ07699 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.29□□□□□ -1.72
SCN1BQ07699 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.29□□□□□ -1.72
SCN1BQ07699 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.29□□□□□ -1.72
SCN1BQ07699 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.29□□□□□ -1.72
SCN1BQ07699 PGAM1P13-201ENST00000507497 754 ntBASIC4.29□□□□□ -1.72
SCN1BQ07699 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.29□□□□□ -1.72
SCN1BQ07699 AC016065.2-201ENST00000514530 444 ntBASIC4.29□□□□□ -1.72
SCN1BQ07699 RNU6-488P-201ENST00000515918 99 ntBASIC4.29□□□□□ -1.72
SCN1BQ07699 AC104115.2-201ENST00000523026 687 ntBASIC4.29□□□□□ -1.72
SCN1BQ07699 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SCN1BQ07699 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.29□□□□□ -1.72
SCN1BQ07699 AC006518.2-201ENST00000542513 940 ntBASIC4.29□□□□□ -1.72
SCN1BQ07699 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.29□□□□□ -1.72
SCN1BQ07699 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.29□□□□□ -1.72
SCN1BQ07699 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.29□□□□□ -1.72
SCN1BQ07699 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.29□□□□□ -1.72
SCN1BQ07699 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.29□□□□□ -1.72
SCN1BQ07699 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SCN1BQ07699 AL121834.1-201ENST00000572284 509 ntBASIC4.29□□□□□ -1.72
SCN1BQ07699 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SCN1BQ07699 BPTFP1-201ENST00000579209 492 ntBASIC4.29□□□□□ -1.72
SCN1BQ07699 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.29□□□□□ -1.72
SCN1BQ07699 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SCN1BQ07699 AL020997.3-201ENST00000602843 359 ntBASIC4.29□□□□□ -1.72
SCN1BQ07699 AP004247.3-201ENST00000608682 624 ntBASIC4.29□□□□□ -1.72
SCN1BQ07699 AP002371.2-201ENST00000624450 503 ntBASIC4.29□□□□□ -1.72
SCN1BQ07699 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SCN1BQ07699 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.29□□□□□ -1.72
SCN1BQ07699 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SCN1BQ07699 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SCN1BQ07699 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SCN1BQ07699 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SCN1BQ07699 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.29□□□□□ -1.72
SCN1BQ07699 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SCN1BQ07699 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.28□□□□□ -1.72
SCN1BQ07699 MTND4P26-201ENST00000415971 1359 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms