Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
ATN1P54259 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
ATN1P54259 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
ATN1P54259 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
ATN1P54259 SND1-IT1-201ENST00000623342 2481 ntBASIC8.21□□□□□ -1.09
ATN1P54259 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
ATN1P54259 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
ATN1P54259 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
ATN1P54259 RNU6-1135P-201ENST00000411083 103 ntBASIC8.21□□□□□ -1.1
ATN1P54259 RNU6-130P-201ENST00000411112 103 ntBASIC8.21□□□□□ -1.1
ATN1P54259 AL158071.1-201ENST00000430315 461 ntBASIC8.21□□□□□ -1.1
ATN1P54259 AC114495.1-201ENST00000441274 436 ntBASIC8.21□□□□□ -1.1
ATN1P54259 RPS7P5-201ENST00000441482 581 ntBASIC8.21□□□□□ -1.1
ATN1P54259 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC8.21□□□□□ -1.1
ATN1P54259 AL031274.1-201ENST00000450334 232 ntBASIC8.21□□□□□ -1.1
ATN1P54259 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC8.21□□□□□ -1.1
ATN1P54259 TECRP2-201ENST00000503270 928 ntBASIC8.21□□□□□ -1.1
ATN1P54259 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC8.21□□□□□ -1.1
ATN1P54259 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC8.21□□□□□ -1.1
ATN1P54259 AC012339.2-201ENST00000523996 453 ntBASIC8.21□□□□□ -1.1
ATN1P54259 MIR4310-201ENST00000582950 57 ntBASIC8.21□□□□□ -1.1
ATN1P54259 AC011487.3-201ENST00000593607 453 ntBASIC8.21□□□□□ -1.1
ATN1P54259 AC103710.2-201ENST00000609912 942 ntBASIC8.21□□□□□ -1.1
ATN1P54259 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC8.21□□□□□ -1.1
ATN1P54259 SNORA43.5-201ENST00000631270 138 ntBASIC8.21□□□□□ -1.1
ATN1P54259 AC073488.8-201ENST00000631952 757 ntBASIC8.21□□□□□ -1.1
ATN1P54259 MTND1P7-201ENST00000632801 297 ntBASIC8.21□□□□□ -1.1
ATN1P54259 AC027559.1-201ENST00000636288 271 ntBASIC8.21□□□□□ -1.1
ATN1P54259 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
ATN1P54259 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC8.21□□□□□ -1.1
ATN1P54259 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC8.21□□□□□ -1.1
ATN1P54259 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
ATN1P54259 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC8.21□□□□□ -1.1
ATN1P54259 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
ATN1P54259 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
ATN1P54259 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
ATN1P54259 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC8.21□□□□□ -1.1
ATN1P54259 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC8.21□□□□□ -1.1
ATN1P54259 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
ATN1P54259 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
ATN1P54259 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC8.21□□□□□ -1.1
ATN1P54259 AC020978.8-201ENST00000571975 3022 ntBASIC8.21□□□□□ -1.1
ATN1P54259 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
ATN1P54259 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
ATN1P54259 AC090643.1-201ENST00000623600 3100 ntBASIC8.2□□□□□ -1.1
ATN1P54259 AC090740.1-201ENST00000623193 2262 ntBASIC8.2□□□□□ -1.1
ATN1P54259 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
ATN1P54259 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
ATN1P54259 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
ATN1P54259 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
ATN1P54259 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC8.2□□□□□ -1.1
ATN1P54259 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
ATN1P54259 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
ATN1P54259 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.2□□□□□ -1.1
ATN1P54259 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
ATN1P54259 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC8.2□□□□□ -1.1
ATN1P54259 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
ATN1P54259 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
ATN1P54259 AC012513.3-201ENST00000623250 2116 ntBASIC8.2□□□□□ -1.1
ATN1P54259 RNU6-666P-201ENST00000363499 107 ntBASIC8.2□□□□□ -1.1
ATN1P54259 RNU6-898P-201ENST00000365627 104 ntBASIC8.2□□□□□ -1.1
ATN1P54259 Y_RNA.586-201ENST00000391146 98 ntBASIC8.2□□□□□ -1.1
ATN1P54259 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC8.2□□□□□ -1.1
ATN1P54259 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC8.2□□□□□ -1.1
ATN1P54259 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC8.2□□□□□ -1.1
ATN1P54259 AL162725.1-201ENST00000435405 301 ntBASIC8.2□□□□□ -1.1
ATN1P54259 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC8.2□□□□□ -1.1
ATN1P54259 SCARNA18-201ENST00000459004 134 ntBASIC8.2□□□□□ -1.1
ATN1P54259 AC094085.1-201ENST00000468914 584 ntBASIC8.2□□□□□ -1.1
ATN1P54259 SSX8-201ENST00000506270 579 ntBASIC8.2□□□□□ -1.1
ATN1P54259 B4GALNT2P1-201ENST00000508857 307 ntBASIC8.2□□□□□ -1.1
ATN1P54259 IGLVIV-64-201ENST00000518581 301 ntBASIC8.2□□□□□ -1.1
ATN1P54259 IGHVII-60-1-201ENST00000519079 256 ntBASIC8.2□□□□□ -1.1
ATN1P54259 AC144568.1-201ENST00000520139 137 ntBASIC8.2□□□□□ -1.1
ATN1P54259 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC8.2□□□□□ -1.1
ATN1P54259 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
ATN1P54259 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC8.2□□□□□ -1.1
ATN1P54259 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC8.2□□□□□ -1.1
ATN1P54259 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC8.2□□□□□ -1.1
ATN1P54259 AC008555.7-201ENST00000605008 583 ntBASIC8.2□□□□□ -1.1
ATN1P54259 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
ATN1P54259 TEX41-293ENST00000630451 690 ntTSL 5 BASIC8.2□□□□□ -1.1
ATN1P54259 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
ATN1P54259 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
ATN1P54259 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
ATN1P54259 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
ATN1P54259 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
ATN1P54259 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
ATN1P54259 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
ATN1P54259 AC006058.1-201ENST00000568686 5067 ntBASIC8.2□□□□□ -1.1
ATN1P54259 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
ATN1P54259 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
ATN1P54259 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
ATN1P54259 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC8.2□□□□□ -1.1
ATN1P54259 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
ATN1P54259 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
ATN1P54259 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
ATN1P54259 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
ATN1P54259 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
ATN1P54259 AC079949.2-201ENST00000617117 2933 ntBASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms