Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 OR8I1P-201ENST00000529291 931 ntBASIC4.66□□□□□ -1.66
COL4A1P02462 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.66□□□□□ -1.66
COL4A1P02462 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
COL4A1P02462 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.66□□□□□ -1.66
COL4A1P02462 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.66□□□□□ -1.66
COL4A1P02462 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.66□□□□□ -1.66
COL4A1P02462 AL442067.2-201ENST00000614033 363 ntBASIC4.66□□□□□ -1.66
COL4A1P02462 AC026368.1-201ENST00000614934 690 ntBASIC4.66□□□□□ -1.66
COL4A1P02462 MIR3651-201ENST00000630427 90 ntBASIC4.66□□□□□ -1.66
COL4A1P02462 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.66□□□□□ -1.66
COL4A1P02462 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.66□□□□□ -1.66
COL4A1P02462 PRO1804-201ENST00000623780 2050 ntBASIC4.65□□□□□ -1.66
COL4A1P02462 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
COL4A1P02462 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC4.65□□□□□ -1.66
COL4A1P02462 RPL21P110-201ENST00000433345 446 ntBASIC4.65□□□□□ -1.66
COL4A1P02462 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.65□□□□□ -1.66
COL4A1P02462 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.65□□□□□ -1.66
COL4A1P02462 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
COL4A1P02462 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.65□□□□□ -1.66
COL4A1P02462 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.65□□□□□ -1.66
COL4A1P02462 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL4A1P02462 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.65□□□□□ -1.67
COL4A1P02462 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL4A1P02462 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.65□□□□□ -1.67
COL4A1P02462 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL4A1P02462 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.65□□□□□ -1.67
COL4A1P02462 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL4A1P02462 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
COL4A1P02462 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.64□□□□□ -1.67
COL4A1P02462 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL4A1P02462 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
COL4A1P02462 PDSS1P1-201ENST00000422953 1114 ntBASIC4.64□□□□□ -1.67
COL4A1P02462 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.64□□□□□ -1.67
COL4A1P02462 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
COL4A1P02462 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.64□□□□□ -1.67
COL4A1P02462 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.64□□□□□ -1.67
COL4A1P02462 IGKV2-23-201ENST00000518729 323 ntBASIC4.64□□□□□ -1.67
COL4A1P02462 AL392088.2-201ENST00000637607 285 ntBASIC4.64□□□□□ -1.67
COL4A1P02462 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL4A1P02462 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL4A1P02462 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL4A1P02462 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COL4A1P02462 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL4A1P02462 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
COL4A1P02462 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
COL4A1P02462 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL4A1P02462 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COL4A1P02462 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
COL4A1P02462 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
COL4A1P02462 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.64□□□□□ -1.67
COL4A1P02462 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.64□□□□□ -1.67
COL4A1P02462 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL4A1P02462 RNU6-525P-201ENST00000363685 104 ntBASIC4.64□□□□□ -1.67
COL4A1P02462 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.64□□□□□ -1.67
COL4A1P02462 GSTM3P2-201ENST00000412746 530 ntBASIC4.64□□□□□ -1.67
COL4A1P02462 RPL7AP73-201ENST00000413490 353 ntBASIC4.64□□□□□ -1.67
COL4A1P02462 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.64□□□□□ -1.67
COL4A1P02462 RPS29P4-201ENST00000414733 161 ntBASIC4.64□□□□□ -1.67
COL4A1P02462 AC017079.2-201ENST00000416102 485 ntBASIC4.64□□□□□ -1.67
COL4A1P02462 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.64□□□□□ -1.67
COL4A1P02462 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COL4A1P02462 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.64□□□□□ -1.67
COL4A1P02462 RNU6-513P-201ENST00000516104 104 ntBASIC4.64□□□□□ -1.67
COL4A1P02462 OR7E13P-201ENST00000526052 910 ntBASIC4.64□□□□□ -1.67
COL4A1P02462 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.64□□□□□ -1.67
COL4A1P02462 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.64□□□□□ -1.67
COL4A1P02462 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
COL4A1P02462 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.64□□□□□ -1.67
COL4A1P02462 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL4A1P02462 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
COL4A1P02462 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL4A1P02462 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL4A1P02462 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC4.63□□□□□ -1.67
COL4A1P02462 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.63□□□□□ -1.67
COL4A1P02462 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL4A1P02462 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
COL4A1P02462 IL6STP1-201ENST00000346911 1020 ntBASIC4.63□□□□□ -1.67
COL4A1P02462 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.63□□□□□ -1.67
COL4A1P02462 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
COL4A1P02462 MIR218-2-201ENST00000385006 110 ntBASIC4.63□□□□□ -1.67
COL4A1P02462 MIR483-201ENST00000385070 76 ntBASIC4.63□□□□□ -1.67
COL4A1P02462 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL4A1P02462 ATP5JP1-201ENST00000431631 322 ntBASIC4.63□□□□□ -1.67
COL4A1P02462 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.63□□□□□ -1.67
COL4A1P02462 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.63□□□□□ -1.67
COL4A1P02462 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.63□□□□□ -1.67
COL4A1P02462 RN7SKP18-201ENST00000516005 275 ntBASIC4.63□□□□□ -1.67
COL4A1P02462 OR5B10P-201ENST00000532869 642 ntBASIC4.63□□□□□ -1.67
COL4A1P02462 GNRHR2P1-201ENST00000555315 631 ntBASIC4.63□□□□□ -1.67
COL4A1P02462 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.63□□□□□ -1.67
COL4A1P02462 AL390816.3-201ENST00000604527 1066 ntBASIC4.63□□□□□ -1.67
COL4A1P02462 AP000255.1-201ENST00000610276 676 ntBASIC4.63□□□□□ -1.67
COL4A1P02462 AC055839.1-201ENST00000634467 498 ntBASIC4.63□□□□□ -1.67
COL4A1P02462 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.63□□□□□ -1.67
COL4A1P02462 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL4A1P02462 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL4A1P02462 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL4A1P02462 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.62□□□□□ -1.67
COL4A1P02462 AC093535.2-201ENST00000624769 2326 ntBASIC4.62□□□□□ -1.67
COL4A1P02462 MIR491-201ENST00000384877 84 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms