Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 RPL22P18-201ENST00000417197 377 ntBASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 GAPDHP49-201ENST00000421421 961 ntBASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 RPL21P110-201ENST00000433345 446 ntBASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 YWHAQP9-201ENST00000445891 512 ntBASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 RHEBP2-201ENST00000450289 600 ntBASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 NAP1L1P3-201ENST00000462291 880 ntBASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 RPL23AP71-201ENST00000470966 469 ntBASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 RPL23AP44-201ENST00000482216 473 ntBASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 AC010627.1-201ENST00000503819 1294 ntBASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 OR5AZ1P-201ENST00000527448 943 ntBASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 SETP1-201ENST00000556014 845 ntBASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 AC245036.5-201ENST00000596330 847 ntBASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 AL020997.3-201ENST00000602843 359 ntBASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 AC105254.2-201ENST00000603636 436 ntBASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 AC021749.1-201ENST00000604322 607 ntBASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 AP000238.1-201ENST00000608759 426 ntBASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 AP002967.1-201ENST00000624203 539 ntBASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 AC009313.2-201ENST00000417893 1941 ntBASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 RPF2P1-201ENST00000424137 906 ntBASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 AC104837.2-201ENST00000427236 424 ntBASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 UBE2V1P5-201ENST00000440070 405 ntBASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 TPMTP4-201ENST00000450749 678 ntBASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 BTF3P13-201ENST00000513224 490 ntBASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 RN7SKP260-201ENST00000516907 149 ntBASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 COX6B1P6-201ENST00000522347 255 ntBASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 BNIP3P1-201ENST00000547295 580 ntBASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 AC044913.1-201ENST00000557200 430 ntBASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 MIR4472-2-201ENST00000582069 67 ntBASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 AC092079.1-201ENST00000558620 1985 ntBASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CHMP4CQ96CF2 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 SETP15-201ENST00000412724 337 ntBASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 NPM1P40-201ENST00000412758 733 ntBASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 HMGB1P49-201ENST00000418882 569 ntBASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 AC027644.1-201ENST00000419595 298 ntBASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 KNOP1P3-201ENST00000446933 426 ntBASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 AC093166.2-201ENST00000455969 1017 ntBASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 RNU6-1218P-201ENST00000458990 108 ntBASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 RPL5P22-201ENST00000480199 884 ntBASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms