Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.17□□□□□ -1.74
HOXC4P09017 AC015922.4-201ENST00000612568 690 ntBASIC4.17□□□□□ -1.74
HOXC4P09017 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXC4P09017 AC006213.4-201ENST00000616184 634 ntBASIC4.17□□□□□ -1.74
HOXC4P09017 ZYXP1-201ENST00000617638 118 ntBASIC4.17□□□□□ -1.74
HOXC4P09017 AC112484.5-201ENST00000624189 228 ntBASIC4.17□□□□□ -1.74
HOXC4P09017 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXC4P09017 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC4P09017 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC4P09017 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC4P09017 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC4P09017 AC093535.2-201ENST00000624769 2326 ntBASIC4.17□□□□□ -1.74
HOXC4P09017 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC4P09017 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC4P09017 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HOXC4P09017 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC4P09017 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC4P09017 RNA5SP515-201ENST00000364570 118 ntBASIC4.16□□□□□ -1.74
HOXC4P09017 GCNT6-201ENST00000379591 934 ntBASIC4.16□□□□□ -1.74
HOXC4P09017 RN7SKP167-201ENST00000411047 285 ntBASIC4.16□□□□□ -1.74
HOXC4P09017 AL356095.1-201ENST00000417217 199 ntBASIC4.16□□□□□ -1.74
HOXC4P09017 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.16□□□□□ -1.74
HOXC4P09017 AL161631.1-201ENST00000417933 486 ntBASIC4.16□□□□□ -1.74
HOXC4P09017 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC4P09017 EIF4EP1-201ENST00000422311 642 ntBASIC4.16□□□□□ -1.74
HOXC4P09017 AC004448.2-201ENST00000422360 586 ntBASIC4.16□□□□□ -1.74
HOXC4P09017 OR4C10P-201ENST00000434991 931 ntBASIC4.16□□□□□ -1.74
HOXC4P09017 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXC4P09017 RPL23AP46-201ENST00000438548 490 ntBASIC4.16□□□□□ -1.74
HOXC4P09017 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXC4P09017 AC005008.1-201ENST00000456151 612 ntBASIC4.16□□□□□ -1.74
HOXC4P09017 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXC4P09017 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXC4P09017 CCDC75P1-201ENST00000469247 791 ntBASIC4.16□□□□□ -1.74
HOXC4P09017 RN7SL817P-201ENST00000480777 288 ntBASIC4.16□□□□□ -1.74
HOXC4P09017 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXC4P09017 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXC4P09017 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXC4P09017 CCNHP1-201ENST00000513311 678 ntBASIC4.16□□□□□ -1.74
HOXC4P09017 MTCYBP19-201ENST00000517463 1124 ntBASIC4.16□□□□□ -1.74
HOXC4P09017 AC025857.1-201ENST00000525252 377 ntBASIC4.16□□□□□ -1.74
HOXC4P09017 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.16□□□□□ -1.74
HOXC4P09017 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXC4P09017 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXC4P09017 SULT1C2P2-201ENST00000562517 294 ntBASIC4.16□□□□□ -1.74
HOXC4P09017 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXC4P09017 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXC4P09017 AL118556.2-201ENST00000614375 824 ntBASIC4.16□□□□□ -1.74
HOXC4P09017 AL138721.1-201ENST00000616756 179 ntBASIC4.16□□□□□ -1.74
HOXC4P09017 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXC4P09017 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC4P09017 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HOXC4P09017 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
HOXC4P09017 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC4P09017 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
HOXC4P09017 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HOXC4P09017 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HOXC4P09017 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HOXC4P09017 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
HOXC4P09017 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HOXC4P09017 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXC4P09017 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HOXC4P09017 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.15□□□□□ -1.75
HOXC4P09017 SNORA57.1-201ENST00000391227 145 ntBASIC4.15□□□□□ -1.75
HOXC4P09017 RPL23AP48-201ENST00000406913 488 ntBASIC4.15□□□□□ -1.75
HOXC4P09017 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC4P09017 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.15□□□□□ -1.75
HOXC4P09017 AC093084.1-201ENST00000424233 687 ntBASIC4.15□□□□□ -1.75
HOXC4P09017 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC4P09017 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC4P09017 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC4P09017 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXC4P09017 AP000936.3-201ENST00000438127 255 ntBASIC4.15□□□□□ -1.75
HOXC4P09017 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXC4P09017 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXC4P09017 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXC4P09017 PGBD4P4-201ENST00000509673 613 ntBASIC4.15□□□□□ -1.75
HOXC4P09017 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
HOXC4P09017 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.15□□□□□ -1.75
HOXC4P09017 RNU6-319P-201ENST00000516025 108 ntBASIC4.15□□□□□ -1.75
HOXC4P09017 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.15□□□□□ -1.75
HOXC4P09017 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC4P09017 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.15□□□□□ -1.75
HOXC4P09017 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC4P09017 NF1P10-201ENST00000613227 742 ntBASIC4.15□□□□□ -1.75
HOXC4P09017 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HOXC4P09017 AC107027.3-201ENST00000565095 3473 ntBASIC4.15□□□□□ -1.75
HOXC4P09017 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXC4P09017 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HOXC4P09017 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXC4P09017 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HOXC4P09017 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
HOXC4P09017 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.15□□□□□ -1.75
HOXC4P09017 SCN1A-220ENST00000641603 12506 ntBASIC4.15□□□□□ -1.75
HOXC4P09017 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXC4P09017 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXC4P09017 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
HOXC4P09017 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXC4P09017 AC027290.2-201ENST00000623210 18662 ntBASIC4.14□□□□□ -1.75
HOXC4P09017 RNA5SP513-201ENST00000364648 118 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms