Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL1A1P02452 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL1A1P02452 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL1A1P02452 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL1A1P02452 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL1A1P02452 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL1A1P02452 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.81□□□□□ -1.64
COL1A1P02452 VDAC2P1-201ENST00000399358 958 ntBASIC4.81□□□□□ -1.64
COL1A1P02452 KRR1P1-201ENST00000419430 803 ntBASIC4.81□□□□□ -1.64
COL1A1P02452 HSPE1P16-201ENST00000426640 348 ntBASIC4.81□□□□□ -1.64
COL1A1P02452 AC091286.1-201ENST00000431233 461 ntBASIC4.81□□□□□ -1.64
COL1A1P02452 CYCSP43-201ENST00000438233 310 ntBASIC4.81□□□□□ -1.64
COL1A1P02452 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.81□□□□□ -1.64
COL1A1P02452 SNORA59A-201ENST00000459326 152 ntBASIC4.81□□□□□ -1.64
COL1A1P02452 RPS3AP6-201ENST00000484430 795 ntBASIC4.81□□□□□ -1.64
COL1A1P02452 IGKV2D-19-201ENST00000523346 262 ntBASIC4.81□□□□□ -1.64
COL1A1P02452 MTND6P33-201ENST00000571794 183 ntBASIC4.81□□□□□ -1.64
COL1A1P02452 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.81□□□□□ -1.64
COL1A1P02452 AC095038.2-201ENST00000621464 1070 ntBASIC4.81□□□□□ -1.64
COL1A1P02452 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.81□□□□□ -1.64
COL1A1P02452 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.81□□□□□ -1.64
COL1A1P02452 HSPD1P11-201ENST00000508643 1702 ntBASIC4.81□□□□□ -1.64
COL1A1P02452 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
COL1A1P02452 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL1A1P02452 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.81□□□□□ -1.64
COL1A1P02452 U1.1-201ENST00000384101 164 ntBASIC4.81□□□□□ -1.64
COL1A1P02452 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.81□□□□□ -1.64
COL1A1P02452 Z74696.2-201ENST00000436514 498 ntBASIC4.81□□□□□ -1.64
COL1A1P02452 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.81□□□□□ -1.64
COL1A1P02452 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.81□□□□□ -1.64
COL1A1P02452 AC007529.1-201ENST00000418574 2178 ntBASIC4.8□□□□□ -1.64
COL1A1P02452 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.8□□□□□ -1.64
COL1A1P02452 AL049781.1-201ENST00000623195 3585 ntBASIC4.8□□□□□ -1.64
COL1A1P02452 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL1A1P02452 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL1A1P02452 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.8□□□□□ -1.64
COL1A1P02452 SAMMSON-213ENST00000641336 1521 ntBASIC4.8□□□□□ -1.64
COL1A1P02452 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
COL1A1P02452 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.8□□□□□ -1.64
COL1A1P02452 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.8□□□□□ -1.64
COL1A1P02452 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.8□□□□□ -1.64
COL1A1P02452 RPL7P49-201ENST00000471402 708 ntBASIC4.8□□□□□ -1.64
COL1A1P02452 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.8□□□□□ -1.64
COL1A1P02452 AC110768.1-201ENST00000509222 400 ntBASIC4.8□□□□□ -1.64
COL1A1P02452 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.8□□□□□ -1.64
COL1A1P02452 TCP11X3P-202ENST00000514289 1254 ntBASIC4.8□□□□□ -1.64
COL1A1P02452 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.8□□□□□ -1.64
COL1A1P02452 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.8□□□□□ -1.64
COL1A1P02452 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.8□□□□□ -1.64
COL1A1P02452 AC012417.1-201ENST00000582307 1039 ntBASIC4.8□□□□□ -1.64
COL1A1P02452 AC005344.1-201ENST00000613391 459 ntBASIC4.8□□□□□ -1.64
COL1A1P02452 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
COL1A1P02452 ZNF285B-201ENST00000561698 1767 ntBASIC4.79□□□□□ -1.64
COL1A1P02452 HCFC2P1-201ENST00000392864 1592 ntBASIC4.79□□□□□ -1.64
COL1A1P02452 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL1A1P02452 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL1A1P02452 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
COL1A1P02452 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL1A1P02452 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL1A1P02452 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL1A1P02452 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.79□□□□□ -1.64
COL1A1P02452 MIR483-201ENST00000385070 76 ntBASIC4.79□□□□□ -1.64
COL1A1P02452 RNU6-316P-201ENST00000391027 107 ntBASIC4.79□□□□□ -1.64
COL1A1P02452 Z97055.1-201ENST00000419730 712 ntBASIC4.79□□□□□ -1.64
COL1A1P02452 EIF4EP1-201ENST00000422311 642 ntBASIC4.79□□□□□ -1.64
COL1A1P02452 KATNBL1P2-201ENST00000433311 835 ntBASIC4.79□□□□□ -1.64
COL1A1P02452 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.79□□□□□ -1.64
COL1A1P02452 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.79□□□□□ -1.64
COL1A1P02452 FABP3P2-201ENST00000453169 399 ntBASIC4.79□□□□□ -1.64
COL1A1P02452 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.79□□□□□ -1.64
COL1A1P02452 RPS26P28-201ENST00000470806 348 ntBASIC4.79□□□□□ -1.64
COL1A1P02452 RN7SL323P-201ENST00000494712 295 ntBASIC4.79□□□□□ -1.64
COL1A1P02452 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.79□□□□□ -1.64
COL1A1P02452 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.79□□□□□ -1.64
COL1A1P02452 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.79□□□□□ -1.64
COL1A1P02452 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.79□□□□□ -1.64
COL1A1P02452 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.79□□□□□ -1.64
COL1A1P02452 SNX6P1-201ENST00000601728 1224 ntBASIC4.79□□□□□ -1.64
COL1A1P02452 AL645927.2-201ENST00000618350 349 ntBASIC4.79□□□□□ -1.64
COL1A1P02452 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.79□□□□□ -1.64
COL1A1P02452 AF001550.2-201ENST00000636643 217 ntBASIC4.79□□□□□ -1.64
COL1A1P02452 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL1A1P02452 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL1A1P02452 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL1A1P02452 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL1A1P02452 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL1A1P02452 RNU1-108P-201ENST00000362556 161 ntBASIC4.78□□□□□ -1.64
COL1A1P02452 GSTM3P2-201ENST00000412746 530 ntBASIC4.78□□□□□ -1.64
COL1A1P02452 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.78□□□□□ -1.64
COL1A1P02452 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.78□□□□□ -1.64
COL1A1P02452 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.78□□□□□ -1.64
COL1A1P02452 RPS4XP12-201ENST00000461747 709 ntBASIC4.78□□□□□ -1.64
COL1A1P02452 AC069240.1-201ENST00000548774 375 ntBASIC4.78□□□□□ -1.64
COL1A1P02452 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
COL1A1P02452 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL1A1P02452 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL1A1P02452 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL1A1P02452 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
COL1A1P02452 AC024560.2-201ENST00000507981 1497 ntBASIC4.77□□□□□ -1.65
COL1A1P02452 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms