Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AL672167.1-205ENST00000641112 3080 ntBASIC5.66□□□□□ -1.5
SALL3Q9BXA9 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 RNU6-697P-201ENST00000363348 107 ntBASIC5.66□□□□□ -1.5
SALL3Q9BXA9 AL049697.2-201ENST00000403708 294 ntBASIC5.66□□□□□ -1.5
SALL3Q9BXA9 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 RN7SKP267-201ENST00000410381 285 ntBASIC5.66□□□□□ -1.5
SALL3Q9BXA9 RNU2-22P-201ENST00000411266 212 ntBASIC5.66□□□□□ -1.5
SALL3Q9BXA9 TATDN1P1-201ENST00000414123 891 ntBASIC5.66□□□□□ -1.5
SALL3Q9BXA9 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 PTP4A1P1-201ENST00000420539 515 ntBASIC5.66□□□□□ -1.5
SALL3Q9BXA9 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 RPL21P91-201ENST00000429231 479 ntBASIC5.66□□□□□ -1.5
SALL3Q9BXA9 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 ARAFP2-201ENST00000440565 559 ntBASIC5.66□□□□□ -1.5
SALL3Q9BXA9 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 AL935212.3-201ENST00000450729 284 ntBASIC5.66□□□□□ -1.5
SALL3Q9BXA9 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 RPL12P20-201ENST00000475538 479 ntBASIC5.66□□□□□ -1.5
SALL3Q9BXA9 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 SYT14P1-201ENST00000481459 721 ntBASIC5.66□□□□□ -1.5
SALL3Q9BXA9 DEFB109F-201ENST00000491870 277 ntBASIC5.66□□□□□ -1.5
SALL3Q9BXA9 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 HMGB1P3-201ENST00000502802 616 ntBASIC5.66□□□□□ -1.5
SALL3Q9BXA9 AC113420.1-201ENST00000507903 571 ntBASIC5.66□□□□□ -1.5
SALL3Q9BXA9 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 OR5BM1P-201ENST00000512021 366 ntBASIC5.66□□□□□ -1.5
SALL3Q9BXA9 AL671862.1-201ENST00000515851 349 ntBASIC5.66□□□□□ -1.5
SALL3Q9BXA9 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 AC067838.1-201ENST00000606064 577 ntBASIC5.66□□□□□ -1.5
SALL3Q9BXA9 AC012557.1-201ENST00000607115 611 ntBASIC5.66□□□□□ -1.5
SALL3Q9BXA9 AC234782.5-201ENST00000617723 324 ntBASIC5.66□□□□□ -1.5
SALL3Q9BXA9 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 AC017037.3-201ENST00000625016 472 ntBASIC5.66□□□□□ -1.5
SALL3Q9BXA9 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.66□□□□□ -1.5
SALL3Q9BXA9 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 SCARNA15-201ENST00000607520 4325 ntBASIC5.66□□□□□ -1.5
SALL3Q9BXA9 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SALL3Q9BXA9 AL355852.1-201ENST00000454081 1771 ntBASIC5.65□□□□□ -1.5
SALL3Q9BXA9 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SALL3Q9BXA9 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
SALL3Q9BXA9 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SALL3Q9BXA9 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SALL3Q9BXA9 AC125336.1-201ENST00000508893 2827 ntBASIC5.65□□□□□ -1.5
SALL3Q9BXA9 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SALL3Q9BXA9 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
SALL3Q9BXA9 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SALL3Q9BXA9 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SALL3Q9BXA9 MIR365B-201ENST00000362317 111 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 RNU6-623P-201ENST00000363143 105 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 SNORD116-9-201ENST00000384000 95 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 SNORD116-3-201ENST00000384287 95 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 SNORD116-7-201ENST00000384404 95 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 SNORD116-5-201ENST00000384462 95 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 TAF9BP2-201ENST00000400856 499 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.65□□□□□ -1.51
SALL3Q9BXA9 AL365396.1-201ENST00000430854 671 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 RAB9AP5-201ENST00000437794 597 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.65□□□□□ -1.51
SALL3Q9BXA9 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.65□□□□□ -1.51
SALL3Q9BXA9 RAB9AP2-201ENST00000443911 597 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 ELOCP30-201ENST00000447108 299 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 AL513533.1-201ENST00000453728 415 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 AC092691.2-201ENST00000461787 803 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 STRADBP1-201ENST00000478954 1281 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 AC083982.1-201ENST00000485679 344 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.65□□□□□ -1.51
SALL3Q9BXA9 SNORA3.4-201ENST00000515969 96 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.65□□□□□ -1.51
SALL3Q9BXA9 AC004923.2-201ENST00000529649 369 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.65□□□□□ -1.51
SALL3Q9BXA9 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.65□□□□□ -1.51
SALL3Q9BXA9 AC084824.1-201ENST00000550917 1005 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.65□□□□□ -1.51
SALL3Q9BXA9 DUXAP6-201ENST00000553858 601 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 AL121839.1-201ENST00000556233 1185 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.65□□□□□ -1.51
SALL3Q9BXA9 AC104229.1-201ENST00000561364 255 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 AP005136.1-201ENST00000579765 429 ntBASIC5.65□□□□□ -1.51
SALL3Q9BXA9 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms