Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CHRDL1Q9BU40 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.8□□□□□ -1.8
CHRDL1Q9BU40 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC3.8□□□□□ -1.8
CHRDL1Q9BU40 RNA5SP108-201ENST00000605921 117 ntBASIC3.8□□□□□ -1.8
CHRDL1Q9BU40 AC009163.6-201ENST00000612367 342 ntBASIC3.8□□□□□ -1.8
CHRDL1Q9BU40 AC090617.9-201ENST00000623751 147 ntBASIC3.8□□□□□ -1.8
CHRDL1Q9BU40 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC3.8□□□□□ -1.8
CHRDL1Q9BU40 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.8□□□□□ -1.8
CHRDL1Q9BU40 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.8□□□□□ -1.8
CHRDL1Q9BU40 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHRDL1Q9BU40 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHRDL1Q9BU40 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.8□□□□□ -1.8
CHRDL1Q9BU40 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHRDL1Q9BU40 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.8□□□□□ -1.8
CHRDL1Q9BU40 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.8□□□□□ -1.8
CHRDL1Q9BU40 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CHRDL1Q9BU40 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHRDL1Q9BU40 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHRDL1Q9BU40 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CHRDL1Q9BU40 EOGT-210ENST00000615922 1931 ntBASIC3.8□□□□□ -1.8
CHRDL1Q9BU40 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 AC008549.2-201ENST00000333482 706 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 RNU1-108P-201ENST00000362556 161 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 RNU1-83P-201ENST00000363426 164 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 OR52E6-202ENST00000379946 954 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 SNORA70E-201ENST00000384492 135 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 MIR765-201ENST00000390226 114 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 CR848007.2-201ENST00000424918 787 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 RPS7P5-201ENST00000441482 581 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 AC092647.3-201ENST00000443044 633 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 AC000111.2-201ENST00000448200 210 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 AC093270.2-201ENST00000486157 792 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 RN7SL97P-201ENST00000486780 299 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 AC109462.1-201ENST00000491087 368 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 FTH1P9-201ENST00000513251 355 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 AP003168.1-201ENST00000530091 307 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 CYCSP28-201ENST00000534284 321 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 VN1R79P-201ENST00000593540 513 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 AC005191.1-201ENST00000603950 358 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 COX6CP4-201ENST00000605798 228 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 EIF3FP1-201ENST00000613970 806 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 AL162574.2-201ENST00000614618 657 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 AC090510.2-201ENST00000617465 629 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 AL713922.2-201ENST00000619384 716 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 AC008758.3-201ENST00000507003 1829 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 KPNA2P2-201ENST00000419546 1489 ntBASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHRDL1Q9BU40 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CHRDL1Q9BU40 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.78□□□□□ -1.8
CHRDL1Q9BU40 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CHRDL1Q9BU40 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
CHRDL1Q9BU40 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHRDL1Q9BU40 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.78□□□□□ -1.8
CHRDL1Q9BU40 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHRDL1Q9BU40 RNU1-20P-201ENST00000363314 162 ntBASIC3.78□□□□□ -1.8
CHRDL1Q9BU40 RNU4-4P-201ENST00000364588 130 ntBASIC3.78□□□□□ -1.8
CHRDL1Q9BU40 RNU6-356P-201ENST00000384140 107 ntBASIC3.78□□□□□ -1.8
CHRDL1Q9BU40 RN7SKP213-201ENST00000410746 298 ntBASIC3.78□□□□□ -1.8
CHRDL1Q9BU40 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CHRDL1Q9BU40 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.78□□□□□ -1.8
CHRDL1Q9BU40 AC093162.1-201ENST00000419682 124 ntBASIC3.78□□□□□ -1.8
CHRDL1Q9BU40 AC007394.1-201ENST00000421941 531 ntBASIC3.78□□□□□ -1.8
CHRDL1Q9BU40 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.78□□□□□ -1.8
CHRDL1Q9BU40 AC069285.2-201ENST00000440210 275 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms