Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDK3Q00526 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.58□□□□□ -1.68
CDK3Q00526 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.58□□□□□ -1.68
CDK3Q00526 MRPL48P1-201ENST00000445390 636 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.58□□□□□ -1.68
CDK3Q00526 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.58□□□□□ -1.68
CDK3Q00526 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 SCARNA10-201ENST00000459255 330 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.58□□□□□ -1.68
CDK3Q00526 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDK3Q00526 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.58□□□□□ -1.68
CDK3Q00526 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.58□□□□□ -1.68
CDK3Q00526 HIGD1AP5-201ENST00000529959 259 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 AP001781.1-201ENST00000530977 207 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.58□□□□□ -1.68
CDK3Q00526 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.58□□□□□ -1.68
CDK3Q00526 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.58□□□□□ -1.68
CDK3Q00526 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.58□□□□□ -1.68
CDK3Q00526 DPRXP4-201ENST00000578053 568 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.58□□□□□ -1.68
CDK3Q00526 AC069061.3-201ENST00000582254 823 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 MIR5096-201ENST00000583713 70 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.58□□□□□ -1.68
CDK3Q00526 AC105148.1-201ENST00000604961 409 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.58□□□□□ -1.68
CDK3Q00526 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.58□□□□□ -1.68
CDK3Q00526 RNU6-1192P-201ENST00000612197 107 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 STMN1P1-201ENST00000617809 440 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 RNU6-489P-201ENST00000618289 107 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 AC024595.1-201ENST00000623088 387 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDK3Q00526 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CDK3Q00526 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDK3Q00526 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDK3Q00526 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.58□□□□□ -1.68
CDK3Q00526 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDK3Q00526 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
CDK3Q00526 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDK3Q00526 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.58□□□□□ -1.68
CDK3Q00526 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDK3Q00526 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDK3Q00526 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
CDK3Q00526 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDK3Q00526 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.58□□□□□ -1.68
CDK3Q00526 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.57□□□□□ -1.68
CDK3Q00526 ZNF849P-201ENST00000594711 1566 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.57□□□□□ -1.68
CDK3Q00526 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDK3Q00526 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDK3Q00526 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDK3Q00526 AC135352.1-201ENST00000506173 1418 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.57□□□□□ -1.68
CDK3Q00526 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.57□□□□□ -1.68
CDK3Q00526 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDK3Q00526 AC021146.4-201ENST00000309229 279 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDK3Q00526 U6.112-201ENST00000384129 70 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 AL590290.1-201ENST00000405336 380 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 CTSL3P-202ENST00000412179 788 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.57□□□□□ -1.68
CDK3Q00526 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDK3Q00526 MTND4P11-201ENST00000417020 1058 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 TRGV6-201ENST00000417928 299 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 PTP4A1P7-201ENST00000423476 514 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 AC115285.1-201ENST00000424879 736 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 RPEP3-201ENST00000425462 676 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 CENPIP1-201ENST00000425713 902 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 AC068287.1-201ENST00000430283 295 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.57□□□□□ -1.68
CDK3Q00526 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.57□□□□□ -1.68
CDK3Q00526 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.57□□□□□ -1.68
CDK3Q00526 AC099063.2-201ENST00000446360 662 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 AC012512.1-201ENST00000446594 718 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 AC104651.2-201ENST00000447549 528 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 AC009220.1-201ENST00000451614 275 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 AC008280.2-201ENST00000455473 307 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.57□□□□□ -1.68
CDK3Q00526 snoU13.1-201ENST00000459157 104 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 HMGB1P38-201ENST00000490557 577 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 AC020890.1-201ENST00000491837 504 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 AC069306.1-201ENST00000507006 843 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 HMGB3P16-201ENST00000508037 287 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.57□□□□□ -1.68
CDK3Q00526 RN7SKP157-201ENST00000516174 282 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 RAB9BP1-201ENST00000519581 626 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.57□□□□□ -1.68
CDK3Q00526 AC083923.1-201ENST00000523708 376 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.57□□□□□ -1.68
CDK3Q00526 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDK3Q00526 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDK3Q00526 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.57□□□□□ -1.68
CDK3Q00526 AP005119.2-201ENST00000579735 1105 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 MIR3936-201ENST00000584304 110 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.57□□□□□ -1.68
CDK3Q00526 AC124856.1-201ENST00000600819 896 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.57□□□□□ -1.68
CDK3Q00526 AC099785.1-201ENST00000605697 437 ntBASIC4.57□□□□□ -1.68
CDK3Q00526 AC100847.1-201ENST00000611316 481 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms