Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CLDN20P56880 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN20P56880 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.48□□□□□ -1.69
CLDN20P56880 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN20P56880 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CLDN20P56880 RNU4-44P-201ENST00000363050 141 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN20P56880 RNU6-224P-201ENST00000384055 107 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 MIR525-201ENST00000384978 85 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN20P56880 MTCO1P56-201ENST00000401674 224 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 AL021331.1-201ENST00000402817 582 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 SSR1P2-201ENST00000415208 787 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.48□□□□□ -1.69
CLDN20P56880 AC048351.1-201ENST00000420064 602 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN20P56880 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.48□□□□□ -1.69
CLDN20P56880 RPL7P11-201ENST00000437586 658 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 PRPF38AP2-201ENST00000438179 851 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN20P56880 AC009263.1-201ENST00000441193 1239 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN20P56880 AC073587.1-201ENST00000447093 876 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN20P56880 AL691482.1-201ENST00000453255 87 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 AL645937.3-201ENST00000453647 936 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.48□□□□□ -1.69
CLDN20P56880 RPL35AP28-201ENST00000459730 331 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 TRBV8-2-201ENST00000475637 270 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 RPL21P6-201ENST00000479171 504 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 AC134050.1-201ENST00000495088 933 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN20P56880 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN20P56880 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.48□□□□□ -1.69
CLDN20P56880 HPRT1P2-201ENST00000505250 544 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.48□□□□□ -1.69
CLDN20P56880 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.48□□□□□ -1.69
CLDN20P56880 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.48□□□□□ -1.69
CLDN20P56880 BTF3P13-201ENST00000513224 490 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 RFPL4AP5-201ENST00000514977 504 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.48□□□□□ -1.69
CLDN20P56880 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.48□□□□□ -1.69
CLDN20P56880 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.48□□□□□ -1.69
CLDN20P56880 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.48□□□□□ -1.69
CLDN20P56880 AC124293.1-201ENST00000530034 493 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN20P56880 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN20P56880 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.48□□□□□ -1.69
CLDN20P56880 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.48□□□□□ -1.69
CLDN20P56880 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.48□□□□□ -1.69
CLDN20P56880 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN20P56880 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.48□□□□□ -1.69
CLDN20P56880 AC011487.3-201ENST00000593607 453 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.48□□□□□ -1.69
CLDN20P56880 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.48□□□□□ -1.69
CLDN20P56880 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.48□□□□□ -1.69
CLDN20P56880 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN20P56880 AC087385.3-201ENST00000620477 187 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.48□□□□□ -1.69
CLDN20P56880 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN20P56880 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN20P56880 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN20P56880 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN20P56880 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN20P56880 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN20P56880 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN20P56880 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN20P56880 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN20P56880 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN20P56880 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN20P56880 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN20P56880 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN20P56880 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.47□□□□□ -1.69
CLDN20P56880 SCN1A-220ENST00000641603 12506 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN20P56880 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN20P56880 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN20P56880 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.47□□□□□ -1.69
CLDN20P56880 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN20P56880 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN20P56880 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN20P56880 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CLDN20P56880 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.47□□□□□ -1.69
CLDN20P56880 RNU4-51P-201ENST00000364206 140 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 RNU6-317P-201ENST00000384031 107 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN20P56880 LRRC37BP1-201ENST00000398851 714 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 MIR1303-201ENST00000408625 86 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 RNA5SP146-201ENST00000410743 123 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.47□□□□□ -1.69
CLDN20P56880 COX6B1P1-201ENST00000415962 213 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.47□□□□□ -1.69
CLDN20P56880 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 AP001324.1-201ENST00000428553 399 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.47□□□□□ -1.69
CLDN20P56880 AC112498.1-201ENST00000444401 332 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 AL929288.2-201ENST00000446368 407 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 AC005002.1-201ENST00000447458 540 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms