Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.51□□□□□ -1.53
GFRA1P56159 ARL2BPP6-201ENST00000512757 439 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 AC074344.1-201ENST00000512823 224 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.51□□□□□ -1.53
GFRA1P56159 AP003467.2-201ENST00000520175 319 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.51□□□□□ -1.53
GFRA1P56159 OR5AP1P-201ENST00000529730 940 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.51□□□□□ -1.53
GFRA1P56159 AC079905.1-201ENST00000549280 475 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.51□□□□□ -1.53
GFRA1P56159 LSM6P2-201ENST00000552208 177 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 RPA2P1-201ENST00000556557 721 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 AL133457.1-201ENST00000564251 987 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.51□□□□□ -1.53
GFRA1P56159 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.51□□□□□ -1.53
GFRA1P56159 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.51□□□□□ -1.53
GFRA1P56159 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.51□□□□□ -1.53
GFRA1P56159 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.51□□□□□ -1.53
GFRA1P56159 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.51□□□□□ -1.53
GFRA1P56159 RPL12P48-201ENST00000605620 304 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.51□□□□□ -1.53
GFRA1P56159 AC091965.4-201ENST00000607691 587 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 AC012409.3-201ENST00000611343 981 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA1P56159 AC009704.2-201ENST00000618739 483 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 AC110994.2-201ENST00000635481 492 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.51□□□□□ -1.53
GFRA1P56159 FAM157B-203ENST00000639350 358 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 AC116667.2-201ENST00000641075 823 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA1P56159 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.51□□□□□ -1.53
GFRA1P56159 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA1P56159 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA1P56159 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.51□□□□□ -1.53
GFRA1P56159 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
GFRA1P56159 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA1P56159 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.51□□□□□ -1.53
GFRA1P56159 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA1P56159 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
GFRA1P56159 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA1P56159 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA1P56159 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA1P56159 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA1P56159 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
GFRA1P56159 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA1P56159 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA1P56159 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
GFRA1P56159 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA1P56159 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.5□□□□□ -1.53
GFRA1P56159 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA1P56159 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA1P56159 RPL23AP57-201ENST00000332361 466 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 RNU105B-201ENST00000364478 208 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 Y_RNA.303-201ENST00000364998 94 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 LCN1P2-201ENST00000372030 223 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 Y_RNA.453-201ENST00000384223 109 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 MTCO3P40-201ENST00000392516 676 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 OR7E101P-201ENST00000400428 513 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
GFRA1P56159 AL023807.1-201ENST00000407932 359 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 RN7SKP285-201ENST00000410137 318 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.5□□□□□ -1.53
GFRA1P56159 NPM1P4-201ENST00000414095 812 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.5□□□□□ -1.53
GFRA1P56159 SPA17P1-201ENST00000416656 452 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 RPS15AP30-201ENST00000420976 390 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.5□□□□□ -1.53
GFRA1P56159 RPL12P12-201ENST00000424633 501 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 ZNF863P-201ENST00000426746 417 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.5□□□□□ -1.53
GFRA1P56159 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.5□□□□□ -1.53
GFRA1P56159 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA1P56159 GAPDHP17-201ENST00000449858 1001 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.5□□□□□ -1.53
GFRA1P56159 BTF3P5-201ENST00000457252 467 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 MTCO1P42-201ENST00000457379 726 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.5□□□□□ -1.53
GFRA1P56159 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.5□□□□□ -1.53
GFRA1P56159 AC025458.1-201ENST00000506046 166 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 RN7SKP238-201ENST00000516483 249 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 RNA5SP340-201ENST00000517132 107 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.5□□□□□ -1.53
GFRA1P56159 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.5□□□□□ -1.53
GFRA1P56159 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
GFRA1P56159 CYCSP28-201ENST00000534284 321 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.5□□□□□ -1.53
GFRA1P56159 AL121594.2-201ENST00000541658 472 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 AC007956.1-201ENST00000555623 542 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.5□□□□□ -1.53
GFRA1P56159 OR4H6P-201ENST00000563771 921 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 AP005119.1-201ENST00000580956 292 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 RNU4ATAC-201ENST00000580972 127 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.5□□□□□ -1.53
GFRA1P56159 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.5□□□□□ -1.53
GFRA1P56159 BCRP9-201ENST00000605312 388 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 AP002360.3-201ENST00000607673 710 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 AC092954.2-201ENST00000609103 430 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.5□□□□□ -1.53
GFRA1P56159 AL590282.1-201ENST00000610379 1136 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 AL352984.2-201ENST00000611153 546 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms