Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC055839.1-201ENST00000634467 498 ntBASIC3.51□□□□□ -1.85
COL8A2P25067 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.51□□□□□ -1.85
COL8A2P25067 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
COL8A2P25067 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
COL8A2P25067 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL8A2P25067 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
COL8A2P25067 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
COL8A2P25067 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL8A2P25067 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.51□□□□□ -1.85
COL8A2P25067 AL606537.1-201ENST00000607258 2011 ntBASIC3.51□□□□□ -1.85
COL8A2P25067 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL8A2P25067 AL356489.2-201ENST00000566968 3528 ntBASIC3.5□□□□□ -1.85
COL8A2P25067 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL8A2P25067 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL8A2P25067 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.5□□□□□ -1.85
COL8A2P25067 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL8A2P25067 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.5□□□□□ -1.85
COL8A2P25067 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
COL8A2P25067 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.5□□□□□ -1.85
COL8A2P25067 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL8A2P25067 RNU1-15P-201ENST00000353977 144 ntBASIC3.5□□□□□ -1.85
COL8A2P25067 RPL21P65-201ENST00000406094 466 ntBASIC3.5□□□□□ -1.85
COL8A2P25067 SNORA11-201ENST00000408789 128 ntBASIC3.5□□□□□ -1.85
COL8A2P25067 GSTM3P2-201ENST00000412746 530 ntBASIC3.5□□□□□ -1.85
COL8A2P25067 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.5□□□□□ -1.85
COL8A2P25067 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL8A2P25067 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.5□□□□□ -1.85
COL8A2P25067 UBTFL3-201ENST00000418934 1024 ntBASIC3.5□□□□□ -1.85
COL8A2P25067 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL8A2P25067 AC073335.1-201ENST00000427776 363 ntBASIC3.5□□□□□ -1.85
COL8A2P25067 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL8A2P25067 CDC27P1-201ENST00000445384 715 ntBASIC3.5□□□□□ -1.85
COL8A2P25067 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.5□□□□□ -1.85
COL8A2P25067 FCF1P7-201ENST00000451185 558 ntBASIC3.5□□□□□ -1.85
COL8A2P25067 UBTFL6-201ENST00000477929 1024 ntBASIC3.5□□□□□ -1.85
COL8A2P25067 RN7SL604P-201ENST00000492589 296 ntBASIC3.5□□□□□ -1.85
COL8A2P25067 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.5□□□□□ -1.85
COL8A2P25067 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.5□□□□□ -1.85
COL8A2P25067 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.5□□□□□ -1.85
COL8A2P25067 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.5□□□□□ -1.85
COL8A2P25067 AC022616.2-201ENST00000523185 300 ntBASIC3.5□□□□□ -1.85
COL8A2P25067 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC3.5□□□□□ -1.85
COL8A2P25067 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.5□□□□□ -1.85
COL8A2P25067 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.5□□□□□ -1.85
COL8A2P25067 AC008126.1-201ENST00000549019 480 ntBASIC3.5□□□□□ -1.85
COL8A2P25067 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.5□□□□□ -1.85
COL8A2P25067 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.5□□□□□ -1.85
COL8A2P25067 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.5□□□□□ -1.85
COL8A2P25067 AC067838.1-201ENST00000606064 577 ntBASIC3.5□□□□□ -1.85
COL8A2P25067 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.5□□□□□ -1.85
COL8A2P25067 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL8A2P25067 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL8A2P25067 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL8A2P25067 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL8A2P25067 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.5□□□□□ -1.85
COL8A2P25067 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.5□□□□□ -1.85
COL8A2P25067 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL8A2P25067 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.5□□□□□ -1.85
COL8A2P25067 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
COL8A2P25067 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.49□□□□□ -1.85
COL8A2P25067 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
COL8A2P25067 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL8A2P25067 RN7SKP280-201ENST00000364196 304 ntBASIC3.49□□□□□ -1.85
COL8A2P25067 RNU1-64P-201ENST00000365443 163 ntBASIC3.49□□□□□ -1.85
COL8A2P25067 AC025750.1-201ENST00000399891 379 ntBASIC3.49□□□□□ -1.85
COL8A2P25067 PPIAP31-201ENST00000405422 495 ntBASIC3.49□□□□□ -1.85
COL8A2P25067 RAB9AP4-201ENST00000415230 609 ntBASIC3.49□□□□□ -1.85
COL8A2P25067 MTND4LP21-201ENST00000415303 295 ntBASIC3.49□□□□□ -1.85
COL8A2P25067 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.49□□□□□ -1.85
COL8A2P25067 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.49□□□□□ -1.85
COL8A2P25067 PTP4A1P1-201ENST00000420539 515 ntBASIC3.49□□□□□ -1.85
COL8A2P25067 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL8A2P25067 SKP1P3-201ENST00000429280 487 ntBASIC3.49□□□□□ -1.85
COL8A2P25067 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.49□□□□□ -1.85
COL8A2P25067 KCTD10P1-201ENST00000434203 625 ntBASIC3.49□□□□□ -1.85
COL8A2P25067 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.49□□□□□ -1.85
COL8A2P25067 AC122718.1-201ENST00000439448 744 ntBASIC3.49□□□□□ -1.85
COL8A2P25067 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC3.49□□□□□ -1.85
COL8A2P25067 AC006011.1-201ENST00000442758 349 ntBASIC3.49□□□□□ -1.85
COL8A2P25067 MTCYBP21-201ENST00000443300 1113 ntBASIC3.49□□□□□ -1.85
COL8A2P25067 PTMAP3-201ENST00000447474 330 ntBASIC3.49□□□□□ -1.85
COL8A2P25067 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.49□□□□□ -1.85
COL8A2P25067 RNA5SP246-201ENST00000458909 119 ntBASIC3.49□□□□□ -1.85
COL8A2P25067 FAM133DP-201ENST00000464802 691 ntBASIC3.49□□□□□ -1.85
COL8A2P25067 RPL5P30-201ENST00000465511 891 ntBASIC3.49□□□□□ -1.85
COL8A2P25067 AC025445.1-201ENST00000502728 300 ntBASIC3.49□□□□□ -1.85
COL8A2P25067 AC108145.1-201ENST00000503770 153 ntBASIC3.49□□□□□ -1.85
COL8A2P25067 BNIP3P41-201ENST00000503774 571 ntBASIC3.49□□□□□ -1.85
COL8A2P25067 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.49□□□□□ -1.85
COL8A2P25067 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.49□□□□□ -1.85
COL8A2P25067 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
COL8A2P25067 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.49□□□□□ -1.85
COL8A2P25067 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.49□□□□□ -1.85
COL8A2P25067 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.49□□□□□ -1.85
COL8A2P25067 MIR6875-201ENST00000617506 72 ntBASIC3.49□□□□□ -1.85
COL8A2P25067 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.49□□□□□ -1.85
COL8A2P25067 AL161637.1-201ENST00000622380 412 ntBASIC3.49□□□□□ -1.85
COL8A2P25067 AC138627.1-204ENST00000641894 765 ntBASIC3.49□□□□□ -1.85
COL8A2P25067 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
COL8A2P25067 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms