Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHRNA1P02708 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.73□□□□□ -1.65
CHRNA1P02708 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CHRNA1P02708 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.73□□□□□ -1.65
CHRNA1P02708 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.73□□□□□ -1.65
CHRNA1P02708 AC062016.2-201ENST00000420950 676 ntBASIC4.73□□□□□ -1.65
CHRNA1P02708 COX6B1P7-201ENST00000430845 235 ntBASIC4.73□□□□□ -1.65
CHRNA1P02708 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.73□□□□□ -1.65
CHRNA1P02708 RPEP2-201ENST00000432149 701 ntBASIC4.73□□□□□ -1.65
CHRNA1P02708 GEMIN8P3-201ENST00000445417 720 ntBASIC4.73□□□□□ -1.65
CHRNA1P02708 AC006326.1-201ENST00000445465 787 ntBASIC4.73□□□□□ -1.65
CHRNA1P02708 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.73□□□□□ -1.65
CHRNA1P02708 RNU6-775P-201ENST00000459318 96 ntBASIC4.73□□□□□ -1.65
CHRNA1P02708 HMGB3P14-201ENST00000494195 599 ntBASIC4.73□□□□□ -1.65
CHRNA1P02708 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.73□□□□□ -1.65
CHRNA1P02708 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.73□□□□□ -1.65
CHRNA1P02708 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.73□□□□□ -1.65
CHRNA1P02708 AC099522.1-202ENST00000514718 367 ntBASIC4.73□□□□□ -1.65
CHRNA1P02708 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.73□□□□□ -1.65
CHRNA1P02708 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.73□□□□□ -1.65
CHRNA1P02708 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.73□□□□□ -1.65
CHRNA1P02708 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.73□□□□□ -1.65
CHRNA1P02708 AC087888.1-201ENST00000550884 1254 ntBASIC4.73□□□□□ -1.65
CHRNA1P02708 AC068446.3-201ENST00000555285 382 ntBASIC4.73□□□□□ -1.65
CHRNA1P02708 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.73□□□□□ -1.65
CHRNA1P02708 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.73□□□□□ -1.65
CHRNA1P02708 AC006130.2-201ENST00000586202 326 ntBASIC4.73□□□□□ -1.65
CHRNA1P02708 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.73□□□□□ -1.65
CHRNA1P02708 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.73□□□□□ -1.65
CHRNA1P02708 BMS1P7-201ENST00000602440 1052 ntBASIC4.73□□□□□ -1.65
CHRNA1P02708 AL160290.3-201ENST00000604869 165 ntBASIC4.73□□□□□ -1.65
CHRNA1P02708 AC007546.1-201ENST00000619452 559 ntBASIC4.73□□□□□ -1.65
CHRNA1P02708 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.73□□□□□ -1.65
CHRNA1P02708 AL133243.3-201ENST00000617415 3004 ntBASIC4.73□□□□□ -1.65
CHRNA1P02708 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHRNA1P02708 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CHRNA1P02708 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
CHRNA1P02708 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
CHRNA1P02708 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHRNA1P02708 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CHRNA1P02708 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHRNA1P02708 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.72□□□□□ -1.65
CHRNA1P02708 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.72□□□□□ -1.65
CHRNA1P02708 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.72□□□□□ -1.65
CHRNA1P02708 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.72□□□□□ -1.65
CHRNA1P02708 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.72□□□□□ -1.65
CHRNA1P02708 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CHRNA1P02708 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CHRNA1P02708 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CHRNA1P02708 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.72□□□□□ -1.65
CHRNA1P02708 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CHRNA1P02708 OR10J6P-201ENST00000289731 930 ntBASIC4.72□□□□□ -1.65
CHRNA1P02708 RNA5SP130-201ENST00000364431 114 ntBASIC4.72□□□□□ -1.65
CHRNA1P02708 MIR921-201ENST00000401133 56 ntBASIC4.72□□□□□ -1.65
CHRNA1P02708 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
CHRNA1P02708 RNU6-628P-201ENST00000410675 107 ntBASIC4.72□□□□□ -1.65
CHRNA1P02708 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.72□□□□□ -1.65
CHRNA1P02708 RPL23AP4-201ENST00000427757 463 ntBASIC4.72□□□□□ -1.65
CHRNA1P02708 AC022022.1-201ENST00000430304 178 ntBASIC4.72□□□□□ -1.65
CHRNA1P02708 CDY14P-201ENST00000431260 1014 ntBASIC4.72□□□□□ -1.65
CHRNA1P02708 CDY12P-201ENST00000440679 1015 ntBASIC4.72□□□□□ -1.65
CHRNA1P02708 CDY13P-201ENST00000445813 1015 ntBASIC4.72□□□□□ -1.65
CHRNA1P02708 CASP3P1-201ENST00000446037 609 ntBASIC4.72□□□□□ -1.65
CHRNA1P02708 AL162388.1-201ENST00000450912 352 ntBASIC4.72□□□□□ -1.65
CHRNA1P02708 CDY23P-201ENST00000451661 1014 ntBASIC4.72□□□□□ -1.65
CHRNA1P02708 DDX39BP2-208ENST00000453923 258 ntBASIC4.72□□□□□ -1.65
CHRNA1P02708 RPL5P32-201ENST00000454085 879 ntBASIC4.72□□□□□ -1.65
CHRNA1P02708 SNORA84-201ENST00000459229 133 ntBASIC4.72□□□□□ -1.65
CHRNA1P02708 AC022795.1-201ENST00000473808 480 ntBASIC4.72□□□□□ -1.65
CHRNA1P02708 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CHRNA1P02708 RPL21P129-201ENST00000491732 478 ntBASIC4.72□□□□□ -1.65
CHRNA1P02708 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.72□□□□□ -1.65
CHRNA1P02708 SAP18P1-201ENST00000512058 390 ntBASIC4.72□□□□□ -1.65
CHRNA1P02708 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.72□□□□□ -1.65
CHRNA1P02708 RNA5SP73-201ENST00000516744 108 ntBASIC4.72□□□□□ -1.65
CHRNA1P02708 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.72□□□□□ -1.65
CHRNA1P02708 AC090819.1-201ENST00000523800 1111 ntBASIC4.72□□□□□ -1.65
CHRNA1P02708 MED28P5-201ENST00000528254 438 ntBASIC4.72□□□□□ -1.65
CHRNA1P02708 OR8X1P-201ENST00000534542 869 ntBASIC4.72□□□□□ -1.65
CHRNA1P02708 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.72□□□□□ -1.65
CHRNA1P02708 AC084373.1-201ENST00000603311 235 ntBASIC4.72□□□□□ -1.65
CHRNA1P02708 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.72□□□□□ -1.65
CHRNA1P02708 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.72□□□□□ -1.65
CHRNA1P02708 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.72□□□□□ -1.65
CHRNA1P02708 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CHRNA1P02708 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHRNA1P02708 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHRNA1P02708 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHRNA1P02708 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHRNA1P02708 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHRNA1P02708 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CHRNA1P02708 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CHRNA1P02708 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHRNA1P02708 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.72□□□□□ -1.65
CHRNA1P02708 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CHRNA1P02708 AL672167.1-205ENST00000641112 3080 ntBASIC4.71□□□□□ -1.65
CHRNA1P02708 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
CHRNA1P02708 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.71□□□□□ -1.65
CHRNA1P02708 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CHRNA1P02708 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms