Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.73□□□□□ -1.65
COL4A1P02462 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.73□□□□□ -1.65
COL4A1P02462 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.73□□□□□ -1.65
COL4A1P02462 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.73□□□□□ -1.65
COL4A1P02462 AL391497.1-201ENST00000608671 547 ntBASIC4.73□□□□□ -1.65
COL4A1P02462 AC016957.2-201ENST00000616998 848 ntBASIC4.73□□□□□ -1.65
COL4A1P02462 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.73□□□□□ -1.65
COL4A1P02462 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL4A1P02462 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.73□□□□□ -1.65
COL4A1P02462 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL4A1P02462 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL4A1P02462 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL4A1P02462 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL4A1P02462 AC074029.4-201ENST00000624796 1859 ntBASIC4.72□□□□□ -1.65
COL4A1P02462 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC4.72□□□□□ -1.65
COL4A1P02462 MIR7-3-201ENST00000384898 110 ntBASIC4.72□□□□□ -1.65
COL4A1P02462 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.72□□□□□ -1.65
COL4A1P02462 AC008280.1-201ENST00000418851 412 ntBASIC4.72□□□□□ -1.65
COL4A1P02462 DBIP2-201ENST00000419076 262 ntBASIC4.72□□□□□ -1.65
COL4A1P02462 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.72□□□□□ -1.65
COL4A1P02462 AL451050.1-201ENST00000450126 415 ntBASIC4.72□□□□□ -1.65
COL4A1P02462 AC021146.3-201ENST00000511911 260 ntBASIC4.72□□□□□ -1.65
COL4A1P02462 DUXAP2-201ENST00000519198 589 ntBASIC4.72□□□□□ -1.65
COL4A1P02462 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.72□□□□□ -1.65
COL4A1P02462 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.72□□□□□ -1.65
COL4A1P02462 MIR5187-201ENST00000583479 76 ntBASIC4.72□□□□□ -1.65
COL4A1P02462 AL391261.4-201ENST00000616012 481 ntBASIC4.72□□□□□ -1.65
COL4A1P02462 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.72□□□□□ -1.65
COL4A1P02462 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.72□□□□□ -1.65
COL4A1P02462 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL4A1P02462 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL4A1P02462 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL4A1P02462 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL4A1P02462 AC058791.1-201ENST00000608412 3198 ntBASIC4.72□□□□□ -1.65
COL4A1P02462 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL4A1P02462 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.72□□□□□ -1.65
COL4A1P02462 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
COL4A1P02462 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
COL4A1P02462 AC007823.1-201ENST00000569932 1566 ntBASIC4.71□□□□□ -1.65
COL4A1P02462 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.71□□□□□ -1.65
COL4A1P02462 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
COL4A1P02462 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL4A1P02462 PRDX3P3-201ENST00000447765 522 ntBASIC4.71□□□□□ -1.66
COL4A1P02462 AC106707.2-201ENST00000484182 374 ntBASIC4.71□□□□□ -1.66
COL4A1P02462 AC005726.1-201ENST00000494679 427 ntBASIC4.71□□□□□ -1.66
COL4A1P02462 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.66
COL4A1P02462 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.71□□□□□ -1.66
COL4A1P02462 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.71□□□□□ -1.66
COL4A1P02462 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.71□□□□□ -1.66
COL4A1P02462 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
COL4A1P02462 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
COL4A1P02462 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL4A1P02462 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL4A1P02462 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL4A1P02462 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL4A1P02462 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
COL4A1P02462 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC4.71□□□□□ -1.66
COL4A1P02462 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL4A1P02462 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
COL4A1P02462 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL4A1P02462 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL4A1P02462 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
COL4A1P02462 AC007068.1-201ENST00000396690 844 ntBASIC4.7□□□□□ -1.66
COL4A1P02462 AC092647.1-201ENST00000420654 287 ntBASIC4.7□□□□□ -1.66
COL4A1P02462 RN7SL293P-201ENST00000481765 281 ntBASIC4.7□□□□□ -1.66
COL4A1P02462 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.7□□□□□ -1.66
COL4A1P02462 HSPD1P15-201ENST00000505573 1122 ntBASIC4.7□□□□□ -1.66
COL4A1P02462 AC096553.1-201ENST00000605169 829 ntBASIC4.7□□□□□ -1.66
COL4A1P02462 AC005972.3-201ENST00000606304 481 ntBASIC4.7□□□□□ -1.66
COL4A1P02462 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
COL4A1P02462 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL4A1P02462 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.7□□□□□ -1.66
COL4A1P02462 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL4A1P02462 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL4A1P02462 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL4A1P02462 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
COL4A1P02462 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.7□□□□□ -1.66
COL4A1P02462 MIR200C-201ENST00000384980 68 ntBASIC4.7□□□□□ -1.66
COL4A1P02462 ATP5A1P2-201ENST00000412323 255 ntBASIC4.7□□□□□ -1.66
COL4A1P02462 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.7□□□□□ -1.66
COL4A1P02462 HMGB1P37-201ENST00000439613 609 ntBASIC4.7□□□□□ -1.66
COL4A1P02462 ARL4AP3-201ENST00000441452 574 ntBASIC4.7□□□□□ -1.66
COL4A1P02462 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.7□□□□□ -1.66
COL4A1P02462 AC008011.1-201ENST00000545989 227 ntBASIC4.7□□□□□ -1.66
COL4A1P02462 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.7□□□□□ -1.66
COL4A1P02462 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.7□□□□□ -1.66
COL4A1P02462 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
COL4A1P02462 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.7□□□□□ -1.66
COL4A1P02462 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC4.7□□□□□ -1.66
COL4A1P02462 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.7□□□□□ -1.66
COL4A1P02462 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.7□□□□□ -1.66
COL4A1P02462 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL4A1P02462 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
COL4A1P02462 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL4A1P02462 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL4A1P02462 KRR1P1-201ENST00000419430 803 ntBASIC4.69□□□□□ -1.66
COL4A1P02462 AC011742.1-201ENST00000431448 434 ntBASIC4.69□□□□□ -1.66
COL4A1P02462 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.69□□□□□ -1.66
COL4A1P02462 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.69□□□□□ -1.66
COL4A1P02462 PSMC1P13-201ENST00000458195 985 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms