Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 DAZ4-203ENST00000382432 2405 ntTSL 5 BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 DAZ2-205ENST00000382433 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 AP000542.3-201ENST00000623391 6114 ntBASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 PSMC1P7-201ENST00000495689 1315 ntBASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 U3.11-201ENST00000364476 212 ntBASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 RNU12-2P-201ENST00000364789 156 ntBASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 RNU6-131P-201ENST00000391144 107 ntBASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 AL080315.1-201ENST00000406055 466 ntBASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 RPL7P47-201ENST00000497299 556 ntBASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 IGHVIII-82-201ENST00000522058 250 ntBASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 AC026371.1-201ENST00000551867 419 ntBASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 AC006254.2-201ENST00000603259 279 ntBASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 AF228730.7-203ENST00000641436 1804 ntBASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 AL391516.1-201ENST00000554380 2449 ntBASIC11.52□□□□□ -0.57
SCAF1Q9H7N4 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 RPL9P21-201ENST00000392269 505 ntBASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 RNU6-1135P-201ENST00000411083 103 ntBASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 AC069213.3-201ENST00000454858 474 ntBASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 RPL36AP13-201ENST00000457490 317 ntBASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 RPS18P13-201ENST00000461260 454 ntBASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 AC011476.1-201ENST00000466725 307 ntBASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 AC138207.8-204ENST00000579588 527 ntBASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 MIR5192-201ENST00000579892 92 ntBASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 AC011487.3-201ENST00000593607 453 ntBASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 AP003789.1-201ENST00000617737 605 ntBASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 FKBP1AP4-201ENST00000631775 336 ntBASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 TEK-204ENST00000519097 3836 ntTSL 2 BASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SCAF1Q9H7N4 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 VPS36-201ENST00000378060 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 CDY11P-201ENST00000447168 1651 ntBASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 SNORA57.2-201ENST00000391265 128 ntBASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 AC090114.1-201ENST00000393266 448 ntBASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 HMGB3P1-201ENST00000393368 573 ntBASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 RNA5SP498-201ENST00000411342 120 ntBASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 AC009153.1-201ENST00000485799 496 ntBASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 AC096745.1-201ENST00000509945 370 ntBASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 LARP7P2-201ENST00000575306 125 ntBASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 AC007347.2-201ENST00000623044 180 ntBASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 AC025034.2-201ENST00000623264 286 ntBASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 AL450992.1-201ENST00000432386 4109 ntTSL 2 BASIC11.5□□□□□ -0.57
SCAF1Q9H7N4 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms