Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 SLC9A6-207ENST00000636092 4697 ntTSL 5 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 ZNF442-201ENST00000242804 6219 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 ERG-210ENST00000442448 5034 ntTSL 5 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 Y_RNA.244-201ENST00000364484 109 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 RNU1-77P-201ENST00000390868 162 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AL022722.2-201ENST00000402519 180 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AL133388.1-201ENST00000404509 287 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AL354751.2-201ENST00000415471 210 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC009161.1-201ENST00000417306 376 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC069157.1-201ENST00000421749 137 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC093655.2-201ENST00000425735 631 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 CYCSP32-201ENST00000440548 321 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 RN7SKP289-201ENST00000517244 295 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC090136.1-201ENST00000520009 240 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 TPRKBP2-201ENST00000565969 475 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AL359821.1-201ENST00000605519 182 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 SSX9-202ENST00000608568 580 ntTSL 4 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC023043.4-201ENST00000612081 449 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC020658.4-201ENST00000613987 684 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC090527.3-201ENST00000619041 548 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 MIR3202-2-201ENST00000635980 79 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 MAML2-201ENST00000524717 7106 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 COL4A6-210ENST00000621266 6627 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 SYNPO2-204ENST00000448416 4298 ntTSL 2 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 NAV2-201ENST00000349880 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 SUPT16HP1-201ENST00000537175 3133 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 Y_RNA.460-201ENST00000384255 102 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 RPL5P19-201ENST00000404228 893 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 RPSAP35-201ENST00000413753 818 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 SSR1P2-201ENST00000415208 787 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AL590639.1-201ENST00000456484 337 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC109925.1-201ENST00000478069 331 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC108064.1-201ENST00000513791 460 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AL391156.1-201ENST00000554965 554 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 UBE2CP1-201ENST00000557130 554 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC106730.2-201ENST00000566641 540 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 MIR3945-201ENST00000581853 98 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC005498.1-201ENST00000592125 465 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AP003117.2-201ENST00000606010 545 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC026585.1-201ENST00000619582 524 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC091046.2-201ENST00000620775 665 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 SERPINB11-209ENST00000624518 573 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 LPGAT1-202ENST00000366997 7782 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC108751.5-201ENST00000492880 1336 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 DAPK2-213ENST00000612884 8086 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 PLXNA3-201ENST00000369682 10885 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 ALPK1-205ENST00000504176 5203 ntAPPRIS ALT2 TSL 2 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms