Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC005191.1-201ENST00000603950 358 ntBASIC4.55□□□□□ -1.68
PDX1P52945 AL158050.2-201ENST00000605336 568 ntBASIC4.55□□□□□ -1.68
PDX1P52945 AC100847.1-201ENST00000611316 481 ntBASIC4.55□□□□□ -1.68
PDX1P52945 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC4.55□□□□□ -1.68
PDX1P52945 AC068724.3-201ENST00000625906 87 ntBASIC4.55□□□□□ -1.68
PDX1P52945 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.55□□□□□ -1.68
PDX1P52945 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.55□□□□□ -1.68
PDX1P52945 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PDX1P52945 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PDX1P52945 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PDX1P52945 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDX1P52945 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDX1P52945 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDX1P52945 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDX1P52945 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.55□□□□□ -1.68
PDX1P52945 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PDX1P52945 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PDX1P52945 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDX1P52945 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PDX1P52945 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDX1P52945 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.54□□□□□ -1.68
PDX1P52945 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDX1P52945 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDX1P52945 CASC19-261ENST00000641853 1638 ntBASIC4.54□□□□□ -1.68
PDX1P52945 CASC19-284ENST00000642142 1868 ntBASIC4.54□□□□□ -1.68
PDX1P52945 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.54□□□□□ -1.68
PDX1P52945 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PDX1P52945 AL645568.2-201ENST00000432815 1337 ntBASIC4.54□□□□□ -1.68
PDX1P52945 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDX1P52945 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDX1P52945 UBBP2-201ENST00000376781 231 ntBASIC4.54□□□□□ -1.68
PDX1P52945 RNU6-1257P-201ENST00000384625 110 ntBASIC4.54□□□□□ -1.68
PDX1P52945 MIR142-201ENST00000384835 87 ntBASIC4.54□□□□□ -1.68
PDX1P52945 MIR122-201ENST00000385044 85 ntBASIC4.54□□□□□ -1.68
PDX1P52945 RN7SKP97-201ENST00000410966 333 ntBASIC4.54□□□□□ -1.68
PDX1P52945 TMBIM7P-201ENST00000418074 855 ntBASIC4.54□□□□□ -1.68
PDX1P52945 AC008173.1-201ENST00000418901 264 ntBASIC4.54□□□□□ -1.68
PDX1P52945 AC140479.3-201ENST00000418944 1126 ntBASIC4.54□□□□□ -1.68
PDX1P52945 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.54□□□□□ -1.68
PDX1P52945 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.54□□□□□ -1.68
PDX1P52945 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.54□□□□□ -1.68
PDX1P52945 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.54□□□□□ -1.68
PDX1P52945 AC044797.1-201ENST00000445744 679 ntBASIC4.54□□□□□ -1.68
PDX1P52945 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.54□□□□□ -1.68
PDX1P52945 AC108463.1-201ENST00000450258 347 ntBASIC4.54□□□□□ -1.68
PDX1P52945 Z95152.1-201ENST00000453556 656 ntBASIC4.54□□□□□ -1.68
PDX1P52945 AC079168.2-201ENST00000453977 416 ntBASIC4.54□□□□□ -1.68
PDX1P52945 RPS4XP12-201ENST00000461747 709 ntBASIC4.54□□□□□ -1.68
PDX1P52945 PPIAP21-201ENST00000464473 501 ntBASIC4.54□□□□□ -1.68
PDX1P52945 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.54□□□□□ -1.68
PDX1P52945 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.54□□□□□ -1.68
PDX1P52945 RPL36AP41-201ENST00000493820 306 ntBASIC4.54□□□□□ -1.68
PDX1P52945 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.54□□□□□ -1.68
PDX1P52945 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.54□□□□□ -1.68
PDX1P52945 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PDX1P52945 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.54□□□□□ -1.68
PDX1P52945 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.54□□□□□ -1.68
PDX1P52945 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.54□□□□□ -1.68
PDX1P52945 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.54□□□□□ -1.68
PDX1P52945 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PDX1P52945 AC093249.4-201ENST00000564755 259 ntBASIC4.54□□□□□ -1.68
PDX1P52945 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.54□□□□□ -1.68
PDX1P52945 AC084783.1-201ENST00000565846 910 ntBASIC4.54□□□□□ -1.68
PDX1P52945 AC023825.1-201ENST00000566704 1030 ntBASIC4.54□□□□□ -1.68
PDX1P52945 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.54□□□□□ -1.68
PDX1P52945 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.54□□□□□ -1.68
PDX1P52945 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.54□□□□□ -1.68
PDX1P52945 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.54□□□□□ -1.68
PDX1P52945 AC018618.2-201ENST00000604770 446 ntBASIC4.54□□□□□ -1.68
PDX1P52945 AC079610.2-201ENST00000604818 690 ntBASIC4.54□□□□□ -1.68
PDX1P52945 AC010857.1-201ENST00000606398 594 ntBASIC4.54□□□□□ -1.68
PDX1P52945 AC093875.1-201ENST00000623688 504 ntBASIC4.54□□□□□ -1.68
PDX1P52945 AP003476.1-201ENST00000623984 516 ntBASIC4.54□□□□□ -1.68
PDX1P52945 AL049536.1-201ENST00000625043 744 ntBASIC4.54□□□□□ -1.68
PDX1P52945 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.54□□□□□ -1.68
PDX1P52945 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PDX1P52945 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDX1P52945 AC120338.1-201ENST00000625074 1541 ntBASIC4.54□□□□□ -1.68
PDX1P52945 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.54□□□□□ -1.68
PDX1P52945 AL606537.1-201ENST00000607258 2011 ntBASIC4.54□□□□□ -1.68
PDX1P52945 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PDX1P52945 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.54□□□□□ -1.68
PDX1P52945 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.54□□□□□ -1.68
PDX1P52945 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDX1P52945 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.54□□□□□ -1.68
PDX1P52945 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PDX1P52945 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PDX1P52945 STX3-208ENST00000641815 3236 ntBASIC4.53□□□□□ -1.68
PDX1P52945 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PDX1P52945 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.53□□□□□ -1.68
PDX1P52945 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
PDX1P52945 DDX18P5-201ENST00000534547 1306 ntBASIC4.53□□□□□ -1.68
PDX1P52945 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PDX1P52945 RNA5SP509-201ENST00000364577 119 ntBASIC4.53□□□□□ -1.68
PDX1P52945 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.53□□□□□ -1.68
PDX1P52945 RNU6-207P-201ENST00000384137 107 ntBASIC4.53□□□□□ -1.68
PDX1P52945 HMGB3P19-201ENST00000403971 560 ntBASIC4.53□□□□□ -1.68
PDX1P52945 HMGB1P13-201ENST00000406019 642 ntBASIC4.53□□□□□ -1.68
PDX1P52945 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.53□□□□□ -1.68
PDX1P52945 GAPDHP49-201ENST00000421421 961 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms