Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AL392112.1-201ENST00000605115 829 ntBASIC4.85□□□□□ -1.63
CTNNA1P35221 AC010680.4-201ENST00000605334 543 ntBASIC4.85□□□□□ -1.63
CTNNA1P35221 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.85□□□□□ -1.63
CTNNA1P35221 AL669942.2-201ENST00000620352 697 ntBASIC4.85□□□□□ -1.63
CTNNA1P35221 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
CTNNA1P35221 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.85□□□□□ -1.63
CTNNA1P35221 U6.107-201ENST00000637108 79 ntBASIC4.85□□□□□ -1.63
CTNNA1P35221 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.85□□□□□ -1.63
CTNNA1P35221 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTNNA1P35221 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CTNNA1P35221 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.85□□□□□ -1.63
CTNNA1P35221 AC025125.1-201ENST00000624743 1922 ntBASIC4.85□□□□□ -1.63
CTNNA1P35221 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CTNNA1P35221 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTNNA1P35221 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.85□□□□□ -1.63
CTNNA1P35221 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CTNNA1P35221 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
CTNNA1P35221 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.84□□□□□ -1.63
CTNNA1P35221 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.84□□□□□ -1.63
CTNNA1P35221 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.84□□□□□ -1.63
CTNNA1P35221 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CTNNA1P35221 MTCO1P11-201ENST00000429111 1528 ntBASIC4.84□□□□□ -1.63
CTNNA1P35221 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTNNA1P35221 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTNNA1P35221 DCAF13P3-201ENST00000561147 1334 ntBASIC4.84□□□□□ -1.63
CTNNA1P35221 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CTNNA1P35221 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.84□□□□□ -1.63
CTNNA1P35221 RSU1P3-201ENST00000412878 835 ntBASIC4.84□□□□□ -1.63
CTNNA1P35221 AC004987.3-201ENST00000413879 771 ntBASIC4.84□□□□□ -1.63
CTNNA1P35221 AC023128.2-201ENST00000420880 1223 ntBASIC4.84□□□□□ -1.63
CTNNA1P35221 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTNNA1P35221 AC005189.1-201ENST00000431286 310 ntBASIC4.84□□□□□ -1.63
CTNNA1P35221 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.84□□□□□ -1.63
CTNNA1P35221 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.84□□□□□ -1.63
CTNNA1P35221 snoU13.20-201ENST00000459180 104 ntBASIC4.84□□□□□ -1.63
CTNNA1P35221 AC089999.1-201ENST00000460336 374 ntBASIC4.84□□□□□ -1.63
CTNNA1P35221 AL035404.1-201ENST00000497982 568 ntBASIC4.84□□□□□ -1.63
CTNNA1P35221 AC010374.1-201ENST00000503762 1237 ntBASIC4.84□□□□□ -1.63
CTNNA1P35221 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.84□□□□□ -1.63
CTNNA1P35221 AC098799.3-201ENST00000506095 438 ntBASIC4.84□□□□□ -1.63
CTNNA1P35221 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTNNA1P35221 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.84□□□□□ -1.63
CTNNA1P35221 RNA5SP360-201ENST00000516555 118 ntBASIC4.84□□□□□ -1.63
CTNNA1P35221 RN7SKP283-201ENST00000517197 270 ntBASIC4.84□□□□□ -1.63
CTNNA1P35221 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.84□□□□□ -1.63
CTNNA1P35221 HMGB1P23-201ENST00000518743 568 ntBASIC4.84□□□□□ -1.63
CTNNA1P35221 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.84□□□□□ -1.63
CTNNA1P35221 AC090151.1-201ENST00000520784 730 ntBASIC4.84□□□□□ -1.63
CTNNA1P35221 OR5AZ1P-201ENST00000527448 943 ntBASIC4.84□□□□□ -1.63
CTNNA1P35221 AC021006.3-201ENST00000530771 192 ntBASIC4.84□□□□□ -1.63
CTNNA1P35221 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.84□□□□□ -1.63
CTNNA1P35221 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTNNA1P35221 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.84□□□□□ -1.63
CTNNA1P35221 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.84□□□□□ -1.63
CTNNA1P35221 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.84□□□□□ -1.63
CTNNA1P35221 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.84□□□□□ -1.63
CTNNA1P35221 MTND6P33-201ENST00000571794 183 ntBASIC4.84□□□□□ -1.63
CTNNA1P35221 AP005119.2-201ENST00000579735 1105 ntBASIC4.84□□□□□ -1.63
CTNNA1P35221 AC008966.2-201ENST00000606157 453 ntBASIC4.84□□□□□ -1.63
CTNNA1P35221 AL353726.1-201ENST00000614041 1000 ntBASIC4.84□□□□□ -1.63
CTNNA1P35221 AC023509.5-201ENST00000617434 807 ntBASIC4.84□□□□□ -1.63
CTNNA1P35221 MIR7154-201ENST00000620673 73 ntBASIC4.84□□□□□ -1.63
CTNNA1P35221 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTNNA1P35221 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTNNA1P35221 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTNNA1P35221 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
CTNNA1P35221 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.84□□□□□ -1.64
CTNNA1P35221 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTNNA1P35221 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTNNA1P35221 C4BPAP1-201ENST00000415474 1893 ntBASIC4.83□□□□□ -1.64
CTNNA1P35221 AC138393.1-206ENST00000540997 1886 ntBASIC4.83□□□□□ -1.64
CTNNA1P35221 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTNNA1P35221 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.83□□□□□ -1.64
CTNNA1P35221 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTNNA1P35221 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CTNNA1P35221 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTNNA1P35221 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.83□□□□□ -1.64
CTNNA1P35221 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTNNA1P35221 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTNNA1P35221 U3.15-201ENST00000365398 212 ntBASIC4.83□□□□□ -1.64
CTNNA1P35221 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
CTNNA1P35221 RN7SKP213-201ENST00000410746 298 ntBASIC4.83□□□□□ -1.64
CTNNA1P35221 RN7SKP167-201ENST00000411047 285 ntBASIC4.83□□□□□ -1.64
CTNNA1P35221 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.83□□□□□ -1.64
CTNNA1P35221 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.83□□□□□ -1.64
CTNNA1P35221 CYCSP42-201ENST00000450823 238 ntBASIC4.83□□□□□ -1.64
CTNNA1P35221 AC016724.1-201ENST00000453215 421 ntBASIC4.83□□□□□ -1.64
CTNNA1P35221 ISCUP1-201ENST00000454451 448 ntBASIC4.83□□□□□ -1.64
CTNNA1P35221 RPS26P28-201ENST00000470806 348 ntBASIC4.83□□□□□ -1.64
CTNNA1P35221 AC010306.1-201ENST00000523223 1117 ntBASIC4.83□□□□□ -1.64
CTNNA1P35221 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.83□□□□□ -1.64
CTNNA1P35221 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.83□□□□□ -1.64
CTNNA1P35221 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.83□□□□□ -1.64
CTNNA1P35221 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.83□□□□□ -1.64
CTNNA1P35221 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.83□□□□□ -1.64
CTNNA1P35221 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.83□□□□□ -1.64
CTNNA1P35221 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.83□□□□□ -1.64
CTNNA1P35221 AL121834.1-201ENST00000572284 509 ntBASIC4.83□□□□□ -1.64
CTNNA1P35221 AC011487.3-201ENST00000593607 453 ntBASIC4.83□□□□□ -1.64
CTNNA1P35221 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms