Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.29□□□□□ -1.4
PDGFAP04085 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFAP04085 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
PDGFAP04085 AC016745.2-201ENST00000608834 3443 ntBASIC6.29□□□□□ -1.4
PDGFAP04085 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
PDGFAP04085 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PDGFAP04085 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PDGFAP04085 RNA5SP188-201ENST00000362916 129 ntBASIC6.29□□□□□ -1.4
PDGFAP04085 Y_RNA.381-201ENST00000365666 102 ntBASIC6.29□□□□□ -1.4
PDGFAP04085 PPIAP26-201ENST00000377951 522 ntBASIC6.29□□□□□ -1.4
PDGFAP04085 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFAP04085 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.29□□□□□ -1.4
PDGFAP04085 DSTNP4-201ENST00000399472 474 ntBASIC6.29□□□□□ -1.4
PDGFAP04085 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.29□□□□□ -1.4
PDGFAP04085 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFAP04085 RN7SKP240-201ENST00000410583 375 ntBASIC6.29□□□□□ -1.4
PDGFAP04085 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFAP04085 RPL12P9-201ENST00000412942 488 ntBASIC6.29□□□□□ -1.4
PDGFAP04085 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.29□□□□□ -1.4
PDGFAP04085 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.29□□□□□ -1.4
PDGFAP04085 AC019097.1-201ENST00000424783 735 ntBASIC6.29□□□□□ -1.4
PDGFAP04085 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.29□□□□□ -1.4
PDGFAP04085 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.29□□□□□ -1.4
PDGFAP04085 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFAP04085 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC6.29□□□□□ -1.4
PDGFAP04085 AL606489.2-201ENST00000433886 234 ntBASIC6.29□□□□□ -1.4
PDGFAP04085 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC6.29□□□□□ -1.4
PDGFAP04085 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.29□□□□□ -1.4
PDGFAP04085 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC6.29□□□□□ -1.4
PDGFAP04085 RPL23AP28-201ENST00000448062 470 ntBASIC6.29□□□□□ -1.4
PDGFAP04085 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.29□□□□□ -1.4
PDGFAP04085 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.29□□□□□ -1.4
PDGFAP04085 RN7SL216P-201ENST00000471607 298 ntBASIC6.29□□□□□ -1.4
PDGFAP04085 AC066616.1-201ENST00000486795 413 ntBASIC6.29□□□□□ -1.4
PDGFAP04085 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
PDGFAP04085 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.29□□□□□ -1.4
PDGFAP04085 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFAP04085 AC010587.1-201ENST00000505809 469 ntBASIC6.29□□□□□ -1.4
PDGFAP04085 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.29□□□□□ -1.4
PDGFAP04085 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFAP04085 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.29□□□□□ -1.4
PDGFAP04085 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFAP04085 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFAP04085 AC093027.1-201ENST00000546698 429 ntBASIC6.29□□□□□ -1.4
PDGFAP04085 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.29□□□□□ -1.4
PDGFAP04085 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFAP04085 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.29□□□□□ -1.4
PDGFAP04085 MIR3167-201ENST00000579623 85 ntBASIC6.29□□□□□ -1.4
PDGFAP04085 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.29□□□□□ -1.4
PDGFAP04085 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6.29□□□□□ -1.4
PDGFAP04085 AC022432.1-201ENST00000595739 310 ntBASIC6.29□□□□□ -1.4
PDGFAP04085 RPL26P30-202ENST00000602923 645 ntBASIC6.29□□□□□ -1.4
PDGFAP04085 AC012175.1-201ENST00000603755 531 ntBASIC6.29□□□□□ -1.4
PDGFAP04085 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFAP04085 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFAP04085 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFAP04085 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFAP04085 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PDGFAP04085 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFAP04085 AC092125.1-201ENST00000562568 1995 ntBASIC6.29□□□□□ -1.4
PDGFAP04085 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFAP04085 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.29□□□□□ -1.4
PDGFAP04085 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PDGFAP04085 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFAP04085 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
PDGFAP04085 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFAP04085 LINC02019-201ENST00000608605 2060 ntBASIC6.29□□□□□ -1.4
PDGFAP04085 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFAP04085 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.28□□□□□ -1.4
PDGFAP04085 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
PDGFAP04085 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFAP04085 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFAP04085 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFAP04085 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
PDGFAP04085 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFAP04085 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFAP04085 LCOR-201ENST00000286067 4542 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.28□□□□□ -1.4
PDGFAP04085 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
PDGFAP04085 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFAP04085 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
PDGFAP04085 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFAP04085 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFAP04085 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFAP04085 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
PDGFAP04085 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
PDGFAP04085 RNU6-1017P-201ENST00000363613 106 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 RNY1P12-201ENST00000364251 105 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 RNA5SP512-201ENST00000364550 120 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
PDGFAP04085 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
PDGFAP04085 AC092642.1-201ENST00000392417 425 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFAP04085 AC068050.1-201ENST00000394891 380 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
PDGFAP04085 OR2W4P-201ENST00000406496 926 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.28□□□□□ -1.4
PDGFAP04085 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC6.28□□□□□ -1.4
PDGFAP04085 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.28□□□□□ -1.4
PDGFAP04085 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms