Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.68□□□□□ -1.66
LDLRP01130 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.68□□□□□ -1.66
LDLRP01130 CYCSP11-201ENST00000436426 315 ntBASIC4.68□□□□□ -1.66
LDLRP01130 AC073052.1-201ENST00000440417 714 ntBASIC4.68□□□□□ -1.66
LDLRP01130 AL450023.3-201ENST00000440592 271 ntBASIC4.68□□□□□ -1.66
LDLRP01130 MTATP6P26-201ENST00000445926 662 ntBASIC4.68□□□□□ -1.66
LDLRP01130 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LDLRP01130 RPL21P18-201ENST00000469899 480 ntBASIC4.68□□□□□ -1.66
LDLRP01130 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.68□□□□□ -1.66
LDLRP01130 RPL21P6-201ENST00000479171 504 ntBASIC4.68□□□□□ -1.66
LDLRP01130 RPS3AP6-201ENST00000484430 795 ntBASIC4.68□□□□□ -1.66
LDLRP01130 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
LDLRP01130 BTF3P13-201ENST00000513224 490 ntBASIC4.68□□□□□ -1.66
LDLRP01130 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.68□□□□□ -1.66
LDLRP01130 AC010476.1-201ENST00000519111 851 ntBASIC4.68□□□□□ -1.66
LDLRP01130 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.68□□□□□ -1.66
LDLRP01130 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.68□□□□□ -1.66
LDLRP01130 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.68□□□□□ -1.66
LDLRP01130 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
LDLRP01130 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.68□□□□□ -1.66
LDLRP01130 MTND1P24-201ENST00000552175 861 ntBASIC4.68□□□□□ -1.66
LDLRP01130 AL110118.1-201ENST00000553543 400 ntBASIC4.68□□□□□ -1.66
LDLRP01130 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.68□□□□□ -1.66
LDLRP01130 YWHAZP1-201ENST00000556286 722 ntBASIC4.68□□□□□ -1.66
LDLRP01130 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.68□□□□□ -1.66
LDLRP01130 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LDLRP01130 BGLT3-201ENST00000564523 994 ntBASIC4.68□□□□□ -1.66
LDLRP01130 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LDLRP01130 AC023825.1-201ENST00000566704 1030 ntBASIC4.68□□□□□ -1.66
LDLRP01130 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.68□□□□□ -1.66
LDLRP01130 MIR5096-201ENST00000583713 70 ntBASIC4.68□□□□□ -1.66
LDLRP01130 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.68□□□□□ -1.66
LDLRP01130 BNIP3P38-201ENST00000601117 544 ntBASIC4.68□□□□□ -1.66
LDLRP01130 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.68□□□□□ -1.66
LDLRP01130 AC018618.2-201ENST00000604770 446 ntBASIC4.68□□□□□ -1.66
LDLRP01130 AC013244.3-201ENST00000605614 388 ntBASIC4.68□□□□□ -1.66
LDLRP01130 AP005432.2-201ENST00000608162 586 ntBASIC4.68□□□□□ -1.66
LDLRP01130 AC007275.1-201ENST00000621243 671 ntBASIC4.68□□□□□ -1.66
LDLRP01130 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.68□□□□□ -1.66
LDLRP01130 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.68□□□□□ -1.66
LDLRP01130 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.68□□□□□ -1.66
LDLRP01130 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LDLRP01130 AL034370.1-201ENST00000397254 1590 ntBASIC4.68□□□□□ -1.66
LDLRP01130 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LDLRP01130 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
LDLRP01130 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
LDLRP01130 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LDLRP01130 MFSD8-213ENST00000641134 1327 ntBASIC4.68□□□□□ -1.66
LDLRP01130 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LDLRP01130 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LDLRP01130 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LDLRP01130 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LDLRP01130 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LDLRP01130 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LDLRP01130 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LDLRP01130 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LDLRP01130 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.67□□□□□ -1.66
LDLRP01130 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.67□□□□□ -1.66
LDLRP01130 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.67□□□□□ -1.66
LDLRP01130 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LDLRP01130 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LDLRP01130 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LDLRP01130 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LDLRP01130 RNU6-452P-201ENST00000384406 107 ntBASIC4.67□□□□□ -1.66
LDLRP01130 MIR122-201ENST00000385044 85 ntBASIC4.67□□□□□ -1.66
LDLRP01130 LRRC37BP1-201ENST00000398851 714 ntBASIC4.67□□□□□ -1.66
LDLRP01130 GLULP6-201ENST00000399502 913 ntBASIC4.67□□□□□ -1.66
LDLRP01130 RPS27AP11-201ENST00000402798 447 ntBASIC4.67□□□□□ -1.66
LDLRP01130 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.67□□□□□ -1.66
LDLRP01130 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.67□□□□□ -1.66
LDLRP01130 SSR1P2-201ENST00000415208 787 ntBASIC4.67□□□□□ -1.66
LDLRP01130 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LDLRP01130 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.67□□□□□ -1.66
LDLRP01130 AC009480.2-201ENST00000422916 432 ntBASIC4.67□□□□□ -1.66
LDLRP01130 FABP7P1-201ENST00000424004 391 ntBASIC4.67□□□□□ -1.66
LDLRP01130 RPL18P10-201ENST00000425606 538 ntBASIC4.67□□□□□ -1.66
LDLRP01130 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.67□□□□□ -1.66
LDLRP01130 AC092162.1-201ENST00000432828 434 ntBASIC4.67□□□□□ -1.66
LDLRP01130 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.67□□□□□ -1.66
LDLRP01130 YWHAZP2-201ENST00000440317 728 ntBASIC4.67□□□□□ -1.66
LDLRP01130 RPL34P26-201ENST00000445636 354 ntBASIC4.67□□□□□ -1.66
LDLRP01130 CASP3P1-201ENST00000446037 609 ntBASIC4.67□□□□□ -1.66
LDLRP01130 AL139824.2-201ENST00000458731 1095 ntBASIC4.67□□□□□ -1.66
LDLRP01130 GTF2IP9-201ENST00000502460 301 ntBASIC4.67□□□□□ -1.66
LDLRP01130 AC010374.1-201ENST00000503762 1237 ntBASIC4.67□□□□□ -1.66
LDLRP01130 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.67□□□□□ -1.66
LDLRP01130 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.67□□□□□ -1.66
LDLRP01130 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LDLRP01130 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.67□□□□□ -1.66
LDLRP01130 RNU6-1004P-201ENST00000516584 111 ntBASIC4.67□□□□□ -1.66
LDLRP01130 RN7SKP260-201ENST00000516907 149 ntBASIC4.67□□□□□ -1.66
LDLRP01130 Y_RNA.717-201ENST00000517106 92 ntBASIC4.67□□□□□ -1.66
LDLRP01130 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.67□□□□□ -1.66
LDLRP01130 AC087894.1-201ENST00000538359 518 ntBASIC4.67□□□□□ -1.66
LDLRP01130 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.67□□□□□ -1.66
LDLRP01130 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.67□□□□□ -1.66
LDLRP01130 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LDLRP01130 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LDLRP01130 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.67□□□□□ -1.66
LDLRP01130 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms