Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC022795.1-201ENST00000473808 480 ntBASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 RPS4XP15-201ENST00000489210 795 ntBASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 RNU6-352P-201ENST00000516908 107 ntBASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 AC007991.1-201ENST00000522680 631 ntBASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 MTCO1P49-201ENST00000523429 802 ntBASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 AC095038.2-201ENST00000621464 1070 ntBASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 AL161637.1-201ENST00000622380 412 ntBASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 LINC01355-201ENST00000566551 5444 ntBASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 RNA5SP171-201ENST00000391071 115 ntBASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 AC108032.1-201ENST00000416706 207 ntBASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 AC087650.1-201ENST00000431445 468 ntBASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 FTLP19-201ENST00000433300 394 ntBASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 RPS29P7-201ENST00000439662 171 ntBASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 AL162151.2-201ENST00000448875 158 ntBASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 PPBPP1-201ENST00000510807 373 ntBASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 AC114878.2-201ENST00000604863 1251 ntBASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 AC039056.2-201ENST00000622261 511 ntBASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 CDRT1-208ENST00000630868 794 ntBASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 AC138627.1-204ENST00000641894 765 ntBASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
KIAA1549Q9HCM3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 AL590806.1-201ENST00000415818 853 ntBASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 RPL31P61-201ENST00000496160 376 ntBASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 AC138409.2-202ENST00000507274 458 ntBASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 TCP11X3P-202ENST00000514289 1254 ntBASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 RNA5SP497-201ENST00000516081 97 ntBASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 RNU6-964P-201ENST00000516524 69 ntBASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 GTF2IP22-201ENST00000554443 182 ntBASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 AC106785.1-201ENST00000565935 262 ntBASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 AC034105.4-201ENST00000568304 277 ntBASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 MTND6P33-201ENST00000571794 183 ntBASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 AP005264.7-201ENST00000625003 745 ntBASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 NAMPTP1-201ENST00000440465 2514 ntBASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 AL359837.1-201ENST00000381357 287 ntBASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 RNU11-4P-201ENST00000391149 133 ntBASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 RN7SKP199-201ENST00000410325 305 ntBASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 AC115285.1-201ENST00000424879 736 ntBASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 AC007537.2-201ENST00000472093 511 ntBASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 AL352979.3-201ENST00000553515 247 ntBASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 MIR4429-201ENST00000580105 73 ntBASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 MIR5684-201ENST00000585074 65 ntBASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
KIAA1549Q9HCM3 AC016588.2-201ENST00000632484 3021 ntBASIC3.68□□□□□ -1.82
KIAA1549Q9HCM3 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.68□□□□□ -1.82
KIAA1549Q9HCM3 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
KIAA1549Q9HCM3 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
KIAA1549Q9HCM3 AC100871.1-201ENST00000507871 1456 ntBASIC3.68□□□□□ -1.82
KIAA1549Q9HCM3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
KIAA1549Q9HCM3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
KIAA1549Q9HCM3 AL161912.2-201ENST00000565707 3007 ntBASIC3.68□□□□□ -1.82
KIAA1549Q9HCM3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC3.68□□□□□ -1.82
KIAA1549Q9HCM3 VPS35P1-201ENST00000563400 1518 ntBASIC3.68□□□□□ -1.82
KIAA1549Q9HCM3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
KIAA1549Q9HCM3 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.68□□□□□ -1.82
KIAA1549Q9HCM3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms