Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 Y_RNA.788-201ENST00000622394 112 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 MTCL1-207ENST00000518815 3963 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 SLC22A14-201ENST00000273173 2202 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 NFRKB-201ENST00000446488 5093 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 ZNF154-202ENST00000512439 5687 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 PCDHGA1-201ENST00000378105 4069 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 RETSAT-201ENST00000295802 3100 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 SLC25A3-203ENST00000401722 6087 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 EXD2-202ENST00000409014 3404 ntTSL 2 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 AC025678.3-201ENST00000623619 4824 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 LINC01310-201ENST00000380981 4015 ntTSL 2 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 RASSF6-203ENST00000342081 4331 ntAPPRIS P4 TSL 2 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 PRKCH-211ENST00000555082 2932 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 MTBP-201ENST00000305949 3059 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 BACH2-202ENST00000343122 3981 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 RAB13-205ENST00000614713 1353 ntTSL 5 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 TLDC1-201ENST00000343629 5046 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 PIK3R4-201ENST00000356763 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 CLIP1-219ENST00000620786 5913 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 AP005435.3-201ENST00000531260 3198 ntBASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 DLG3-210ENST00000542398 4529 ntTSL 2 BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 DCLK1-201ENST00000255448 5703 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP3-3Q9BYR6 KIF26B-201ENST00000366518 12113 ntTSL 5 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 ETFB-202ENST00000354232 3551 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 BTN3A1-202ENST00000289361 3434 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 OPTN-202ENST00000378747 3400 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 ARFIP1-205ENST00000451320 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 OTOG-203ENST00000399397 9948 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 MACF1-234ENST00000641012 4284 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 PTBP3-203ENST00000343327 2755 ntTSL 2 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 SUN1-205ENST00000405266 4062 ntTSL 5 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 MCF2-209ENST00000520602 3945 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 C2orf42-205ENST00000420306 2193 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 MICAL3-204ENST00000414725 4756 ntTSL 5 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 NBPF25P-201ENST00000606775 2019 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 BABAM2-202ENST00000344773 1852 ntTSL 2 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 MTFR1L-204ENST00000374307 1868 ntTSL 2 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 THBS1-201ENST00000260356 7775 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 TGOLN2-202ENST00000377386 6489 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 USP13-203ENST00000496897 2747 ntTSL 2 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 ZNF185-211ENST00000535861 4421 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 RBM44-202ENST00000409864 3449 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 ZNF439-203ENST00000455282 2408 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 MYO1H-202ENST00000431443 4258 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 OR2T35-201ENST00000317450 972 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 RNU6-888P-201ENST00000363010 101 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 RNU1-96P-201ENST00000364163 162 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 RNU4-67P-201ENST00000364569 141 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 RNA5-8SP4-201ENST00000365096 150 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 RNA5SP19-201ENST00000365186 109 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 PADI1-201ENST00000375471 3846 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 SCGB2B2-201ENST00000379204 426 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 U8.15-201ENST00000390947 134 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 SNORD77.3-201ENST00000391113 65 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 AL513302.1-201ENST00000415679 428 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 CNN2P9-201ENST00000417134 909 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 OR7E110P-201ENST00000431186 574 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 AC136896.1-201ENST00000438334 547 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 AL356356.1-201ENST00000442435 665 ntTSL 5 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 AL359073.1-201ENST00000448036 403 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 AC000111.2-201ENST00000448200 210 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 RPL7AP71-201ENST00000451120 739 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 AL357055.1-201ENST00000457967 410 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 MIR2110-201ENST00000459421 75 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 AC007207.1-201ENST00000489396 555 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 AC010442.2-201ENST00000509301 407 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 RNA5SP291-201ENST00000517222 105 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 NR1H3-230ENST00000527949 1065 ntTSL 2 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 AC007375.2-201ENST00000557752 603 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 AC120498.2-201ENST00000566997 249 ntTSL 3 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 AC116914.1-201ENST00000575043 398 ntTSL 2 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 MIR3923-201ENST00000579521 83 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 MIR5006-201ENST00000583027 110 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 MIR5197-201ENST00000583721 112 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 MIR4439-201ENST00000583746 80 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 RN7SL296P-201ENST00000585237 299 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 AC003002.2-201ENST00000597658 456 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 ASMTL-AS1-205ENST00000602357 435 ntTSL 2 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 AC007450.3-201ENST00000620115 247 ntBASIC5.01□□□□□ -1.61
KRTAP3-3Q9BYR6 IGLV2-8-201ENST00000620395 517 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms