Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 U2.1-201ENST00000618978 145 ntBASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
COL25A1Q9BXS0 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL25A1Q9BXS0 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL25A1Q9BXS0 CYP2C8-211ENST00000539050 2024 ntTSL 3 BASIC6.65□□□□□ -1.35
COL25A1Q9BXS0 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL25A1Q9BXS0 AC127459.1-201ENST00000563129 2768 ntBASIC6.65□□□□□ -1.35
COL25A1Q9BXS0 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COL25A1Q9BXS0 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
COL25A1Q9BXS0 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COL25A1Q9BXS0 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL25A1Q9BXS0 WDR95P-201ENST00000425638 1542 ntBASIC6.65□□□□□ -1.35
COL25A1Q9BXS0 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC6.65□□□□□ -1.35
COL25A1Q9BXS0 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC6.65□□□□□ -1.35
COL25A1Q9BXS0 AF287957.1-201ENST00000607368 1595 ntBASIC6.65□□□□□ -1.35
COL25A1Q9BXS0 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COL25A1Q9BXS0 ZNF383-208ENST00000590503 1673 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
COL25A1Q9BXS0 OR4G1P-202ENST00000641173 1788 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 OR51E1-202ENST00000530215 2942 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 CREM-208ENST00000361599 2170 ntTSL 5 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 RNU6-216P-201ENST00000363282 104 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 RNA5SP172-201ENST00000365061 118 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 RNU6-456P-201ENST00000384493 107 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 RPL7P25-201ENST00000404151 721 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 HNRNPDLP1-201ENST00000412834 550 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 CHEK2P3-201ENST00000416118 248 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 OR10T1P-201ENST00000424327 947 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 AC073335.1-201ENST00000427776 363 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 AL954705.1-201ENST00000435277 559 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 HMGB1P12-201ENST00000438594 598 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 AC005077.1-201ENST00000449226 375 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 AC104306.1-201ENST00000449702 371 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 AC090638.1-201ENST00000498296 909 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 AP001189.2-201ENST00000527320 189 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 RRN3P3-201ENST00000549207 578 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 BNIP3P6-201ENST00000549284 499 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 AC124068.1-201ENST00000563131 678 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 MIR544B-201ENST00000582372 78 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 AC245389.1-201ENST00000605141 529 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 MTND5P28-201ENST00000438005 1594 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 AL359854.1-201ENST00000614203 1594 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 AC119674.1-202ENST00000641333 1860 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 AC006058.1-201ENST00000568686 5067 ntBASIC6.64□□□□□ -1.35
COL25A1Q9BXS0 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AC009831.5-201ENST00000624000 3189 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms