Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 MIR7702-201ENST00000621931 59 ntBASIC3.8□□□□□ -1.8
LRRC28Q86X40 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.8□□□□□ -1.8
LRRC28Q86X40 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRC28Q86X40 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
LRRC28Q86X40 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
LRRC28Q86X40 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LRRC28Q86X40 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LRRC28Q86X40 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.8□□□□□ -1.8
LRRC28Q86X40 AC027287.1-201ENST00000553115 1453 ntBASIC3.79□□□□□ -1.8
LRRC28Q86X40 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC28Q86X40 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.79□□□□□ -1.8
LRRC28Q86X40 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC28Q86X40 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC28Q86X40 FAM3C2-201ENST00000312214 681 ntBASIC3.79□□□□□ -1.8
LRRC28Q86X40 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC28Q86X40 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LRRC28Q86X40 SNORA3C-201ENST00000408792 125 ntBASIC3.79□□□□□ -1.8
LRRC28Q86X40 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.79□□□□□ -1.8
LRRC28Q86X40 AL356387.2-201ENST00000422272 243 ntBASIC3.79□□□□□ -1.8
LRRC28Q86X40 RPL7AP25-201ENST00000423357 805 ntBASIC3.79□□□□□ -1.8
LRRC28Q86X40 RPS12P10-201ENST00000427031 377 ntBASIC3.79□□□□□ -1.8
LRRC28Q86X40 AP001324.1-201ENST00000428553 399 ntBASIC3.79□□□□□ -1.8
LRRC28Q86X40 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRC28Q86X40 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRC28Q86X40 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.79□□□□□ -1.8
LRRC28Q86X40 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LRRC28Q86X40 AL133244.1-201ENST00000456007 258 ntBASIC3.79□□□□□ -1.8
LRRC28Q86X40 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.79□□□□□ -1.8
LRRC28Q86X40 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.79□□□□□ -1.8
LRRC28Q86X40 AC106872.2-201ENST00000494303 480 ntBASIC3.79□□□□□ -1.8
LRRC28Q86X40 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.79□□□□□ -1.8
LRRC28Q86X40 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRC28Q86X40 AC109458.1-201ENST00000508858 316 ntBASIC3.79□□□□□ -1.8
LRRC28Q86X40 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.79□□□□□ -1.8
LRRC28Q86X40 AC009643.1-201ENST00000532030 391 ntBASIC3.79□□□□□ -1.8
LRRC28Q86X40 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.79□□□□□ -1.8
LRRC28Q86X40 AC012409.3-201ENST00000611343 981 ntBASIC3.79□□□□□ -1.8
LRRC28Q86X40 Z73965.1-201ENST00000623412 2297 ntBASIC3.79□□□□□ -1.8
LRRC28Q86X40 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC28Q86X40 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC28Q86X40 AC007390.2-201ENST00000606229 3803 ntBASIC3.79□□□□□ -1.8
LRRC28Q86X40 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.79□□□□□ -1.8
LRRC28Q86X40 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC28Q86X40 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC28Q86X40 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.78□□□□□ -1.8
LRRC28Q86X40 HSPD1P11-201ENST00000508643 1702 ntBASIC3.78□□□□□ -1.8
LRRC28Q86X40 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRC28Q86X40 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRC28Q86X40 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
LRRC28Q86X40 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
LRRC28Q86X40 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRC28Q86X40 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRC28Q86X40 AL627171.1-201ENST00000618845 1308 ntBASIC3.78□□□□□ -1.8
LRRC28Q86X40 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRC28Q86X40 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
LRRC28Q86X40 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRC28Q86X40 RNA5SP322-201ENST00000363617 119 ntBASIC3.78□□□□□ -1.8
LRRC28Q86X40 RNU1-89P-201ENST00000384592 164 ntBASIC3.78□□□□□ -1.8
LRRC28Q86X40 MIR659-201ENST00000384963 97 ntBASIC3.78□□□□□ -1.8
LRRC28Q86X40 U3.22-201ENST00000391120 215 ntBASIC3.78□□□□□ -1.8
LRRC28Q86X40 SNORD66.1-201ENST00000391230 76 ntBASIC3.78□□□□□ -1.8
LRRC28Q86X40 RPS20P14-201ENST00000412545 360 ntBASIC3.78□□□□□ -1.8
LRRC28Q86X40 AL161631.1-201ENST00000417933 486 ntBASIC3.78□□□□□ -1.8
LRRC28Q86X40 CYP4F29P-201ENST00000420685 446 ntBASIC3.78□□□□□ -1.8
LRRC28Q86X40 ARAFP1-201ENST00000422172 605 ntBASIC3.78□□□□□ -1.8
LRRC28Q86X40 RPL18P10-201ENST00000425606 538 ntBASIC3.78□□□□□ -1.8
LRRC28Q86X40 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.78□□□□□ -1.8
LRRC28Q86X40 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.78□□□□□ -1.8
LRRC28Q86X40 RPL12P46-201ENST00000436610 195 ntBASIC3.78□□□□□ -1.8
LRRC28Q86X40 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRC28Q86X40 RPL23AP43-201ENST00000446445 471 ntBASIC3.78□□□□□ -1.8
LRRC28Q86X40 EIF2S2P4-201ENST00000461070 984 ntBASIC3.78□□□□□ -1.8
LRRC28Q86X40 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRC28Q86X40 AC013356.1-201ENST00000489027 564 ntBASIC3.78□□□□□ -1.8
LRRC28Q86X40 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.78□□□□□ -1.8
LRRC28Q86X40 AC002456.2-201ENST00000509356 380 ntBASIC3.78□□□□□ -1.8
LRRC28Q86X40 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LRRC28Q86X40 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.78□□□□□ -1.8
LRRC28Q86X40 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LRRC28Q86X40 MIR4277-201ENST00000578298 84 ntBASIC3.78□□□□□ -1.8
LRRC28Q86X40 AL159169.2-201ENST00000610061 1269 ntBASIC3.78□□□□□ -1.8
LRRC28Q86X40 AL645927.2-201ENST00000618350 349 ntBASIC3.78□□□□□ -1.8
LRRC28Q86X40 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.78□□□□□ -1.8
LRRC28Q86X40 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.78□□□□□ -1.8
LRRC28Q86X40 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRC28Q86X40 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRC28Q86X40 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LRRC28Q86X40 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC28Q86X40 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC28Q86X40 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.77□□□□□ -1.81
LRRC28Q86X40 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
LRRC28Q86X40 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC28Q86X40 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC28Q86X40 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.77□□□□□ -1.81
LRRC28Q86X40 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.77□□□□□ -1.81
LRRC28Q86X40 RNU4-39P-201ENST00000362455 127 ntBASIC3.77□□□□□ -1.81
LRRC28Q86X40 RN7SKP44-201ENST00000363602 316 ntBASIC3.77□□□□□ -1.81
LRRC28Q86X40 RPL23AP59-201ENST00000399415 461 ntBASIC3.77□□□□□ -1.81
LRRC28Q86X40 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.77□□□□□ -1.81
LRRC28Q86X40 AL732292.1-201ENST00000426692 226 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms