Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXA1P49639 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HOXA1P49639 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXA1P49639 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXA1P49639 FMO7P-201ENST00000436045 768 ntBASIC4.24□□□□□ -1.73
HOXA1P49639 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXA1P49639 HMGB3P6-201ENST00000444896 598 ntBASIC4.24□□□□□ -1.73
HOXA1P49639 AL929288.2-201ENST00000446368 407 ntBASIC4.24□□□□□ -1.73
HOXA1P49639 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXA1P49639 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXA1P49639 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.24□□□□□ -1.73
HOXA1P49639 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.24□□□□□ -1.73
HOXA1P49639 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXA1P49639 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.24□□□□□ -1.73
HOXA1P49639 AC094085.1-201ENST00000468914 584 ntBASIC4.24□□□□□ -1.73
HOXA1P49639 RPS26P3-201ENST00000470205 348 ntBASIC4.24□□□□□ -1.73
HOXA1P49639 AC096741.1-201ENST00000472250 846 ntBASIC4.24□□□□□ -1.73
HOXA1P49639 AC090543.2-201ENST00000483963 348 ntBASIC4.24□□□□□ -1.73
HOXA1P49639 AC004057.1-201ENST00000485827 348 ntBASIC4.24□□□□□ -1.73
HOXA1P49639 AP000563.1-201ENST00000490865 758 ntBASIC4.24□□□□□ -1.73
HOXA1P49639 AC084024.2-201ENST00000503480 791 ntBASIC4.24□□□□□ -1.73
HOXA1P49639 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXA1P49639 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXA1P49639 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXA1P49639 snoZ278.1-201ENST00000517059 112 ntBASIC4.24□□□□□ -1.73
HOXA1P49639 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXA1P49639 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.24□□□□□ -1.73
HOXA1P49639 MTCO2P15-201ENST00000532655 656 ntBASIC4.24□□□□□ -1.73
HOXA1P49639 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HOXA1P49639 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXA1P49639 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.24□□□□□ -1.73
HOXA1P49639 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXA1P49639 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXA1P49639 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.24□□□□□ -1.73
HOXA1P49639 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXA1P49639 AC125494.3-201ENST00000602759 455 ntBASIC4.24□□□□□ -1.73
HOXA1P49639 AC008536.1-201ENST00000602872 669 ntBASIC4.24□□□□□ -1.73
HOXA1P49639 DUXAP3-201ENST00000603616 594 ntBASIC4.24□□□□□ -1.73
HOXA1P49639 AC114878.2-201ENST00000604863 1251 ntBASIC4.24□□□□□ -1.73
HOXA1P49639 AL445423.1-201ENST00000609941 536 ntBASIC4.24□□□□□ -1.73
HOXA1P49639 AC055764.2-201ENST00000610089 670 ntBASIC4.24□□□□□ -1.73
HOXA1P49639 VN1R74P-201ENST00000613259 503 ntBASIC4.24□□□□□ -1.73
HOXA1P49639 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.24□□□□□ -1.73
HOXA1P49639 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXA1P49639 LINC02211-204ENST00000642024 1070 ntBASIC4.24□□□□□ -1.73
HOXA1P49639 SEC63P2-201ENST00000503863 1939 ntBASIC4.24□□□□□ -1.73
HOXA1P49639 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HOXA1P49639 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HOXA1P49639 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXA1P49639 AC011266.1-201ENST00000624119 3569 ntBASIC4.24□□□□□ -1.73
HOXA1P49639 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.24□□□□□ -1.73
HOXA1P49639 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.24□□□□□ -1.73
HOXA1P49639 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXA1P49639 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXA1P49639 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.23□□□□□ -1.73
HOXA1P49639 AC012321.1-201ENST00000561622 1588 ntBASIC4.23□□□□□ -1.73
HOXA1P49639 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXA1P49639 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA1P49639 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA1P49639 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXA1P49639 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HOXA1P49639 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA1P49639 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA1P49639 RNU1-87P-201ENST00000363727 170 ntBASIC4.23□□□□□ -1.73
HOXA1P49639 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXA1P49639 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA1P49639 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HOXA1P49639 SDHDP6-201ENST00000414693 480 ntBASIC4.23□□□□□ -1.73
HOXA1P49639 OR4K6P-201ENST00000416478 897 ntBASIC4.23□□□□□ -1.73
HOXA1P49639 RPL34P3-201ENST00000421454 338 ntBASIC4.23□□□□□ -1.73
HOXA1P49639 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA1P49639 FABP7P1-201ENST00000424004 391 ntBASIC4.23□□□□□ -1.73
HOXA1P49639 SRSF1P1-201ENST00000424058 520 ntBASIC4.23□□□□□ -1.73
HOXA1P49639 AL662874.1-201ENST00000426065 230 ntBASIC4.23□□□□□ -1.73
HOXA1P49639 AC084290.1-201ENST00000434995 374 ntBASIC4.23□□□□□ -1.73
HOXA1P49639 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA1P49639 AL592437.1-201ENST00000443781 492 ntBASIC4.23□□□□□ -1.73
HOXA1P49639 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA1P49639 SETD6P1-201ENST00000444575 317 ntBASIC4.23□□□□□ -1.73
HOXA1P49639 AC105399.1-202ENST00000447303 205 ntBASIC4.23□□□□□ -1.73
HOXA1P49639 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXA1P49639 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA1P49639 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXA1P49639 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
HOXA1P49639 AC091959.2-201ENST00000477363 321 ntBASIC4.23□□□□□ -1.73
HOXA1P49639 AC004263.1-201ENST00000479327 332 ntBASIC4.23□□□□□ -1.73
HOXA1P49639 RN7SL809P-201ENST00000482040 297 ntBASIC4.23□□□□□ -1.73
HOXA1P49639 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA1P49639 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA1P49639 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA1P49639 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXA1P49639 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA1P49639 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.23□□□□□ -1.73
HOXA1P49639 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXA1P49639 NRBF2P4-201ENST00000520874 850 ntBASIC4.23□□□□□ -1.73
HOXA1P49639 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA1P49639 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA1P49639 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXA1P49639 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA1P49639 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms