Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXC12P31275 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
HOXC12P31275 AC093809.1-201ENST00000509155 340 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 AC106872.4-201ENST00000510050 523 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC12P31275 SNORA70.11-201ENST00000515987 138 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 SNORA70.13-201ENST00000516116 138 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 AC022878.1-201ENST00000530684 149 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXC12P31275 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC12P31275 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC12P31275 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXC12P31275 AC068714.1-201ENST00000559623 800 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXC12P31275 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXC12P31275 SLC25A36P1-201ENST00000590111 465 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXC12P31275 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXC12P31275 AL355816.1-201ENST00000607951 118 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 AC103710.1-201ENST00000610003 901 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 AP001506.1-201ENST00000615444 211 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXC12P31275 AC005618.4-201ENST00000625053 554 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 OR2L1P-202ENST00000641567 1023 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC12P31275 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXC12P31275 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC12P31275 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC12P31275 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC12P31275 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC12P31275 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXC12P31275 AC010624.4-201ENST00000597606 1351 ntBASIC5.64□□□□□ -1.51
HOXC12P31275 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXC12P31275 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC12P31275 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXC12P31275 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC12P31275 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC12P31275 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXC12P31275 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC12P31275 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXC12P31275 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC12P31275 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC12P31275 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC12P31275 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXC12P31275 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC12P31275 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXC12P31275 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
HOXC12P31275 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
HOXC12P31275 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC12P31275 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXC12P31275 Y_RNA.390-201ENST00000383932 102 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 RNU6-809P-201ENST00000384461 107 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 AL360271.1-201ENST00000395679 510 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 PRRC2CP1-201ENST00000404428 159 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXC12P31275 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXC12P31275 RPS3AP24-201ENST00000407896 734 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 RN7SKP229-201ENST00000410465 302 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 RN7SKP281-201ENST00000410472 352 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXC12P31275 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXC12P31275 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXC12P31275 OSTCP4-201ENST00000424397 449 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 AL354707.3-201ENST00000427308 331 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 NPM1P34-201ENST00000428821 893 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXC12P31275 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXC12P31275 SNRPEP7-201ENST00000438350 220 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 AC073614.1-201ENST00000438690 650 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 MTATP6P30-201ENST00000443540 664 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXC12P31275 COX4I1P2-201ENST00000447446 547 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 Z99127.3-201ENST00000448158 395 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.63□□□□□ -1.51
HOXC12P31275 AL590365.1-201ENST00000450788 243 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXC12P31275 RN7SL72P-201ENST00000460697 269 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 AC092989.1-201ENST00000481235 277 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 FAM172BP-201ENST00000487497 1089 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 GM2AP2-201ENST00000491764 562 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 AC002456.2-201ENST00000509356 380 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.63□□□□□ -1.51
HOXC12P31275 RNU6-347P-201ENST00000516658 105 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 SNORA18.6-201ENST00000516792 115 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXC12P31275 AP000790.1-201ENST00000528891 737 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 PMS2P3-207ENST00000529061 717 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXC12P31275 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXC12P31275 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.63□□□□□ -1.51
HOXC12P31275 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXC12P31275 AL389895.1-201ENST00000554127 252 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXC12P31275 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXC12P31275 SNORD39.3-201ENST00000584451 71 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXC12P31275 AC112191.3-201ENST00000604371 277 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 AC072046.2-201ENST00000618366 268 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 AC124864.2-201ENST00000624736 186 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms