Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 DDX18P4-201ENST00000511690 1966 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 TLK1P1-201ENST00000456760 2440 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AL031595.2-201ENST00000624215 19071 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 SMG1P6-201ENST00000532337 2930 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 RNU6-1339P-201ENST00000363574 91 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 RNU6-225P-201ENST00000384613 103 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 HIGD1AP4-201ENST00000430194 280 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AL451139.1-201ENST00000434718 346 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 SETP8-201ENST00000435341 628 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 MRPL48P1-201ENST00000445390 636 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AL929288.2-201ENST00000446368 407 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AC005002.1-201ENST00000447458 540 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 MRPL35P4-201ENST00000453682 566 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 CYCSP34-201ENST00000458172 304 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AC005410.1-202ENST00000460347 485 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AC005532.2-201ENST00000467154 373 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 FTH1P11-201ENST00000517577 551 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AC145350.1-201ENST00000567426 208 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AC022884.3-201ENST00000579571 248 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 DUXAP3-201ENST00000603616 594 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AC009948.4-201ENST00000604692 675 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AL121932.1-201ENST00000605542 214 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AC007497.1-201ENST00000610421 561 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AL353662.3-201ENST00000625131 237 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TCRBV7S3A2A0A539 AC099654.2-201ENST00000433031 1980 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AC068870.3-201ENST00000625077 2536 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 MRRFP1-201ENST00000435941 1675 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AL359922.3-201ENST00000624779 1670 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 IGKV7-3-201ENST00000357453 298 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 U3.30-201ENST00000391308 210 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AL079342.2-201ENST00000403367 482 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AP000534.2-201ENST00000412729 568 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 RPF2P1-201ENST00000424137 906 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms