Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC103792.1-201ENST00000603591 919 ntBASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 AL049844.2-201ENST00000604280 628 ntBASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 AC011944.2-201ENST00000624440 683 ntBASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 AL356489.2-201ENST00000566968 3528 ntBASIC4.62□□□□□ -1.67
TM9SF3Q9HD45 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 MIR1193-201ENST00000408109 78 ntBASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 RPL17P36-201ENST00000420302 549 ntBASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 RPL7AP25-201ENST00000423357 805 ntBASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 YWHAZP2-201ENST00000440317 728 ntBASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 EIF2S2P5-201ENST00000457635 968 ntBASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 AC104763.1-201ENST00000475274 360 ntBASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 CDH12P2-201ENST00000504393 298 ntBASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 AC147055.1-201ENST00000509261 750 ntBASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 AC007016.1-201ENST00000512110 244 ntBASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 DEFB109D-201ENST00000529497 240 ntBASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 MIR3939-201ENST00000582614 106 ntBASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 AC012409.3-201ENST00000611343 981 ntBASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 AC006453.5-201ENST00000636451 619 ntBASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 AC025031.4-201ENST00000621248 3271 ntBASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.61□□□□□ -1.67
TM9SF3Q9HD45 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 RNU1-83P-201ENST00000363426 164 ntBASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 MIR708-201ENST00000390708 88 ntBASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 RPS24P12-201ENST00000402084 394 ntBASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 RGS17P1-201ENST00000423358 553 ntBASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 DPY19L1P2-201ENST00000426647 915 ntBASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 AC090142.1-201ENST00000465776 462 ntBASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 AC106806.2-201ENST00000509365 500 ntBASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 AC021146.7-201ENST00000509604 775 ntBASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 IGLVIV-65-201ENST00000517313 360 ntBASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 OR7E10P-201ENST00000526420 991 ntBASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 AC090948.1-201ENST00000607464 549 ntBASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 AC067852.7-201ENST00000623270 535 ntBASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 AL359715.4-201ENST00000606629 1436 ntBASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 AC007390.2-201ENST00000606229 3803 ntBASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TM9SF3Q9HD45 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 AC021146.4-201ENST00000309229 279 ntBASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 OR6C69P-201ENST00000394268 893 ntBASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 OR1F12-201ENST00000402365 945 ntBASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 AL078604.1-201ENST00000404609 466 ntBASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 U3.35-201ENST00000408405 208 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms