Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AC119674.1-212ENST00000641155 993 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 MAPK10-349ENST00000641767 3661 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 STX3-208ENST00000641815 3236 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 THAP12P4-201ENST00000528321 2266 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 RNU6-543P-201ENST00000362576 108 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 RNU1-87P-201ENST00000363727 170 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 RNU6-353P-201ENST00000364266 108 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 RNU4-4P-201ENST00000364588 130 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 RN7SKP216-201ENST00000411050 312 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 RN7SKP126-201ENST00000411143 300 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AC013404.1-201ENST00000413068 249 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 FABP7P2-201ENST00000429946 379 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 PSMD10P3-201ENST00000437000 448 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AC112492.1-201ENST00000449607 712 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AL356981.1-201ENST00000454879 684 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 RNU7-140P-201ENST00000459546 60 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AC005410.1-202ENST00000460347 485 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AC009127.1-201ENST00000467090 155 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AC082651.2-201ENST00000496833 166 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AC117522.2-201ENST00000510049 657 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AP000859.1-201ENST00000525536 307 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AC116553.2-201ENST00000564203 463 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AC023813.2-201ENST00000564321 469 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AGGF1P6-201ENST00000569213 976 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 OR1F2P-201ENST00000570470 933 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 MTND4LP24-201ENST00000572277 291 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AC069366.1-201ENST00000583159 838 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AC015688.2-201ENST00000584523 262 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 ZNF92P3-201ENST00000596594 954 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 MIR6748-201ENST00000610433 71 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AC084782.3-201ENST00000612282 578 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 AC083843.3-201ENST00000623679 2186 ntBASIC5.2□□□□□ -1.58
USP29Q9HBJ7 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP29Q9HBJ7 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AC017079.1-201ENST00000333650 415 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 RN7SKP113-201ENST00000363891 295 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 RNU6-532P-201ENST00000384318 107 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 SNORD116-8-201ENST00000384365 95 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AL078599.1-201ENST00000402075 293 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 MIR1271-201ENST00000408537 86 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 RN7SKP114-201ENST00000410327 279 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 VTA1P1-201ENST00000414044 866 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 ELOCP9-201ENST00000418624 239 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 DPY19L1P2-201ENST00000426647 915 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.19□□□□□ -1.58
USP29Q9HBJ7 TXNP5-201ENST00000441043 315 ntBASIC5.19□□□□□ -1.58
USP29Q9HBJ7 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms