Protein–RNA interactions for Protein: Q9BYQ8

KRTAP4-9, Keratin-associated protein 4-9, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-9Q9BYQ8 MYH9-201ENST00000216181 7501 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 TIMM10B-201ENST00000254616 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 MTO1-205ENST00000415954 2837 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 NFASC-207ENST00000404907 5447 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 NUTM1-201ENST00000333756 3795 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 AC020912.1-201ENST00000638312 5059 ntTSL 5 BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 TRPV5-203ENST00000442623 2120 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 SEZ6L2-204ENST00000537485 3423 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 TBRG1-203ENST00000441174 4004 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 DHX8-201ENST00000262415 5558 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 TECPR2-203ENST00000558678 4281 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 CUX1-221ENST00000622516 2990 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 MMS19-202ENST00000355839 3555 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 ZC4H2-203ENST00000447788 2649 ntTSL 2 BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 BCL2L13-216ENST00000616863 4761 ntTSL 4 BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 SEC23B-203ENST00000377465 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 FNBP1-204ENST00000446176 5393 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 MRPL19-202ENST00000393909 3479 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 AHCYL1-201ENST00000359172 2503 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 FP700111.1-201ENST00000441760 2502 ntTSL 2 BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 M1AP-209ENST00000536235 2531 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 LMX1A-201ENST00000294816 3350 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 MCOLN3-203ENST00000370589 2756 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 SEMA3F-AS1-202ENST00000437204 2755 ntTSL 2 BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 SMARCA2-258ENST00000637103 5657 ntTSL 5 BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 EYA1-206ENST00000388743 2199 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 ACAN-206ENST00000559004 7628 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 CSGALNACT1-201ENST00000332246 3872 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 ATP6V0D2-201ENST00000285393 2446 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 SYNPO2-201ENST00000307142 7295 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 ZNF197-202ENST00000344387 3275 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 ATP7B-204ENST00000400370 3252 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 FLRT2-204ENST00000554746 3278 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 ARHGEF15-202ENST00000421050 4138 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP4-9Q9BYQ8 CAMTA2-203ENST00000381311 4374 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 BTN3A1-203ENST00000414912 2077 ntTSL 2 BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 MYO1H-202ENST00000431443 4258 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 ADPRH-201ENST00000357003 3439 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 RALGDS-204ENST00000393157 3689 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 ITGB6-205ENST00000428609 2576 ntTSL 2 BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 ASAP3-209ENST00000495646 2552 ntTSL 2 BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 TBC1D16-201ENST00000310924 10936 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 WASF1-204ENST00000392586 2815 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 AL596202.1-201ENST00000435295 3088 ntTSL 2 BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 C9orf85-206ENST00000486911 3321 ntTSL 5 BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 THBS1-201ENST00000260356 7775 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 ZBTB39-201ENST00000300101 6170 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 STX16-203ENST00000358029 4329 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 IL36RN-202ENST00000393200 2700 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 AC134508.1-201ENST00000570082 2977 ntBASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 TACR1-201ENST00000305249 4959 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 SYT2-201ENST00000367267 7614 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 ADAM32-201ENST00000379907 2601 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 NFIB-206ENST00000397575 2869 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 TTC31-202ENST00000410003 3358 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 CD44-210ENST00000434472 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 ADAR-201ENST00000368471 6515 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 CYFIP1-203ENST00000610365 4515 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 MOCS1-203ENST00000373186 4256 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 AC073869.1-202ENST00000438378 3785 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 ASXL2-202ENST00000404843 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 SPEF2-201ENST00000282469 3026 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 INTS9-211ENST00000521022 2544 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 TTI2-206ENST00000613904 2516 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 GBA-202ENST00000368373 2276 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 ABLIM1-203ENST00000369253 2255 ntTSL 5 BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 NRP1-208ENST00000395995 5826 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 KLHL32-204ENST00000536676 3699 ntTSL 2 BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 PLEKHS1-201ENST00000354462 3403 ntTSL 5 BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 SYBU-202ENST00000399066 3435 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 GOSR2-218ENST00000638634 3446 ntTSL 5 BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 RSPH10B2-201ENST00000297186 2923 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 SIPA1L2-202ENST00000308942 2937 ntTSL 2 BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 RSPH10B-201ENST00000337579 2923 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 SNORD115-39-201ENST00000363694 82 ntBASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 RNU6-753P-201ENST00000363926 107 ntBASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 RNU4-67P-201ENST00000364569 141 ntBASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 RNU6-336P-201ENST00000364891 107 ntBASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 RNU6-384P-201ENST00000364900 104 ntBASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 RNU6-690P-201ENST00000365242 106 ntBASIC3.16□□□□□ -1.9
KRTAP4-9Q9BYQ8 RNU6-637P-201ENST00000384050 107 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms