Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.22□□□□□ -1.25
HLA-CQ95604 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.22□□□□□ -1.25
HLA-CQ95604 AC010323.2-201ENST00000596405 594 ntBASIC7.22□□□□□ -1.25
HLA-CQ95604 AL513327.3-201ENST00000602618 469 ntBASIC7.22□□□□□ -1.25
HLA-CQ95604 AC114477.1-201ENST00000605097 605 ntBASIC7.22□□□□□ -1.25
HLA-CQ95604 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.22□□□□□ -1.25
HLA-CQ95604 AL365434.2-201ENST00000607979 234 ntBASIC7.22□□□□□ -1.25
HLA-CQ95604 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC7.22□□□□□ -1.25
HLA-CQ95604 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
HLA-CQ95604 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HLA-CQ95604 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC7.22□□□□□ -1.25
HLA-CQ95604 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.22□□□□□ -1.25
HLA-CQ95604 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HLA-CQ95604 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HLA-CQ95604 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC7.22□□□□□ -1.25
HLA-CQ95604 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC7.22□□□□□ -1.25
HLA-CQ95604 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
HLA-CQ95604 AC016930.1-201ENST00000468766 2205 ntBASIC7.21□□□□□ -1.25
HLA-CQ95604 AC104964.2-201ENST00000562242 4641 ntBASIC7.21□□□□□ -1.25
HLA-CQ95604 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.25
HLA-CQ95604 TCP11X1-202ENST00000622971 1372 ntBASIC7.21□□□□□ -1.25
HLA-CQ95604 AC090337.1-201ENST00000579651 2074 ntBASIC7.21□□□□□ -1.25
HLA-CQ95604 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.25
HLA-CQ95604 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
HLA-CQ95604 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC7.21□□□□□ -1.25
HLA-CQ95604 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
HLA-CQ95604 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
HLA-CQ95604 AC007406.5-201ENST00000570140 3170 ntBASIC7.21□□□□□ -1.25
HLA-CQ95604 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.21□□□□□ -1.25
HLA-CQ95604 AC018992.1-201ENST00000523778 2149 ntBASIC7.21□□□□□ -1.25
HLA-CQ95604 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.25
HLA-CQ95604 CASC19-205ENST00000641013 1411 ntBASIC7.21□□□□□ -1.25
HLA-CQ95604 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC7.21□□□□□ -1.26
HLA-CQ95604 AL121768.1-201ENST00000613917 2544 ntBASIC7.21□□□□□ -1.26
HLA-CQ95604 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
HLA-CQ95604 RNU6-1017P-201ENST00000363613 106 ntBASIC7.21□□□□□ -1.26
HLA-CQ95604 RNU6-343P-201ENST00000364709 104 ntBASIC7.21□□□□□ -1.26
HLA-CQ95604 RNU6-954P-201ENST00000411355 107 ntBASIC7.21□□□□□ -1.26
HLA-CQ95604 MCFD2P1-201ENST00000417812 300 ntBASIC7.21□□□□□ -1.26
HLA-CQ95604 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.21□□□□□ -1.26
HLA-CQ95604 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
HLA-CQ95604 AC018865.2-201ENST00000423631 129 ntBASIC7.21□□□□□ -1.26
HLA-CQ95604 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC7.21□□□□□ -1.26
HLA-CQ95604 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC7.21□□□□□ -1.26
HLA-CQ95604 FABP5P14-201ENST00000437273 393 ntBASIC7.21□□□□□ -1.26
HLA-CQ95604 SDHCP3-201ENST00000445371 506 ntBASIC7.21□□□□□ -1.26
HLA-CQ95604 RN7SL379P-201ENST00000479912 293 ntBASIC7.21□□□□□ -1.26
HLA-CQ95604 HMGB1P30-201ENST00000492455 606 ntBASIC7.21□□□□□ -1.26
HLA-CQ95604 AC015911.1-201ENST00000495111 156 ntBASIC7.21□□□□□ -1.26
HLA-CQ95604 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC7.21□□□□□ -1.26
HLA-CQ95604 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC7.21□□□□□ -1.26
HLA-CQ95604 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.21□□□□□ -1.26
HLA-CQ95604 HAUS8P1-201ENST00000549005 542 ntBASIC7.21□□□□□ -1.26
HLA-CQ95604 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC7.21□□□□□ -1.26
HLA-CQ95604 MTCO3P23-201ENST00000561363 289 ntBASIC7.21□□□□□ -1.26
HLA-CQ95604 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC7.21□□□□□ -1.26
HLA-CQ95604 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC7.21□□□□□ -1.26
HLA-CQ95604 AP001029.3-201ENST00000588063 596 ntBASIC7.21□□□□□ -1.26
HLA-CQ95604 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC7.21□□□□□ -1.26
HLA-CQ95604 AC104184.1-201ENST00000607513 721 ntBASIC7.21□□□□□ -1.26
HLA-CQ95604 AL391813.2-201ENST00000609113 322 ntBASIC7.21□□□□□ -1.26
HLA-CQ95604 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.21□□□□□ -1.26
HLA-CQ95604 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
HLA-CQ95604 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
HLA-CQ95604 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC7.21□□□□□ -1.26
HLA-CQ95604 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
HLA-CQ95604 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
HLA-CQ95604 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
HLA-CQ95604 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
HLA-CQ95604 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
HLA-CQ95604 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
HLA-CQ95604 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
HLA-CQ95604 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
HLA-CQ95604 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC7.21□□□□□ -1.26
HLA-CQ95604 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.21□□□□□ -1.26
HLA-CQ95604 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
HLA-CQ95604 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC7.21□□□□□ -1.26
HLA-CQ95604 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
HLA-CQ95604 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.21□□□□□ -1.26
HLA-CQ95604 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.26
HLA-CQ95604 TDGF1P3-202ENST00000602699 2710 ntBASIC7.21□□□□□ -1.26
HLA-CQ95604 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
HLA-CQ95604 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-CQ95604 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-CQ95604 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-CQ95604 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-CQ95604 AC087501.5-201ENST00000607496 2374 ntBASIC7.2□□□□□ -1.26
HLA-CQ95604 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-CQ95604 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.2□□□□□ -1.26
HLA-CQ95604 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.2□□□□□ -1.26
HLA-CQ95604 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.2□□□□□ -1.26
HLA-CQ95604 TAB3P1-202ENST00000452645 1634 ntBASIC7.2□□□□□ -1.26
HLA-CQ95604 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.2□□□□□ -1.26
HLA-CQ95604 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.2□□□□□ -1.26
HLA-CQ95604 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-CQ95604 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-CQ95604 AC015871.3-201ENST00000618835 2261 ntBASIC7.2□□□□□ -1.26
HLA-CQ95604 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-CQ95604 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.2□□□□□ -1.26
HLA-CQ95604 AC121333.1-201ENST00000567488 2709 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms