Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 ARL6IP1P1-201ENST00000545836 610 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AL845552.1-201ENST00000556820 323 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AC116312.1-201ENST00000606841 314 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AL355802.3-201ENST00000607571 545 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 OR6R2P-201ENST00000609216 300 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AC012488.1-201ENST00000611221 640 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AC090971.5-201ENST00000621102 293 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AL118496.1-201ENST00000440201 1812 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 HSPD1P8-201ENST00000400121 1658 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AL606537.1-201ENST00000607258 2011 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 TTC41P-205ENST00000551270 3963 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AL592148.3-201ENST00000608771 2646 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 Y_RNA.231-201ENST00000364358 102 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 RPS3AP5-201ENST00000389400 821 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 MIR548P-201ENST00000408336 84 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 SNORA2C-201ENST00000408564 137 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AC004987.3-201ENST00000413879 771 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AC009237.9-201ENST00000414800 347 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 SNX18P3-201ENST00000424993 835 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 DUTP6-201ENST00000425573 462 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AC009299.1-201ENST00000429684 717 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 BRK1P2-201ENST00000442875 223 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 CDC42P2-201ENST00000448566 569 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AC130509.1-201ENST00000464158 433 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AC018475.1-201ENST00000478358 465 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 RN7SL335P-201ENST00000482790 304 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 ATP5LP5-201ENST00000483050 299 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 RN7SL182P-201ENST00000496499 300 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AC104057.1-201ENST00000515547 497 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 RNU6-1170P-201ENST00000515974 106 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 SCOCP1-201ENST00000554676 349 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AC012182.1-201ENST00000570133 895 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AC090615.1-201ENST00000577519 154 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AL512782.1-201ENST00000603093 364 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 MIR6774-201ENST00000614651 70 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AC008121.3-201ENST00000618726 433 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AL596245.1-201ENST00000618994 362 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 MTND5P42-201ENST00000637720 498 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AC009313.2-201ENST00000417893 1941 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms